Pseudonaja textilis (eastern brown snake): 113437693
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Entry
113437693 CDS
T09005
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113437693 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113437693 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113437693 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptex00535
]
113437693 (COL9A2)
Proteoglycans [BR:
ptex00535
]
Extracellular matrix (ECM) proteoglycans
Others
113437693 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113437693
NCBI-ProteinID:
XP_026558604
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MARLLNLCFLLQSFVFSLSQLQGPPGEPGPRGPPGPPGVPGADGIDGDKGPPGAAGVPGI
KGDPGLPGPDGAPGKPGIDGLTGAKGEPGRVGRPGPKGQLGLPGPPGLPGPGFPGTPGPP
GHIGLPGEMGPLGLKGERGPDGPQGPPGPPGKPGPIGRIQGVEGSADFVCPTNCPPGLKG
PPGLQGLKGPRGDVGLSGEQGSQGSPGPEGPRGHPGMAGPKGEMGPQGYKGMTGSIGAVG
PPGEDGPRGPPGQVGEKGEIGPRGFSGAQGEMGPKGTRGLPGIDGKPGFPGTPGLKGSVG
QPGLPGPLGHRGVAGLPGTPGSKGGPGEKGEPGTRGPSGLPGPPGKIGEPGPAGAVGLQG
ISGVKGDRGERGPTGPPGPQGKGGAKGDQGPPGIPGPQGLPGVKGSKGFPGKIGSKGNIG
DSGVEGLSGGKGQKGELGEPGPKGQQGIHGEPGFPGPPGDIGAPGVRGFQGPPGPRGLNG
ERGVPGMPGLPGGPGRDTGDQHIVEVVVKMLQEQLAELAVSAKRETLGGSGVMGPPGPPG
PPGPPGSQGPHGHPGSRGLPGILGAVGQIGNTGPKGKRGEKGDQGEAGRGHQGMPGPLGI
PGPPGQPGQALNGKHGERGVPGTPGEAGRPGLPGPSGLPGFCEAVVCLGASASAQLTEVG
SVKGPSY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctagattgctgaatctctgcttccttctccaaagctttgtcttctccttaagccag
ttgcaaggtccgccaggagaacctgggccacggggccccccaggtccgcccggtgtgcca
ggagcagacggcattgatggcgataaaggtccccccggtgcggcaggcgttcctgggatc
aaaggagatccaggcctgccaggaccagatggagctccaggaaaacccggaatagatggc
cttacgggagctaaaggagagccaggccgtgttggaagaccaggtcccaaaggccaattg
ggacttccaggaccaccggggctcccaggacccggatttccagggactcccggcccccca
ggtcacattggacttcctggagaaatgggaccattgggacttaagggggaacgtggacca
gatggaccacaaggacctccaggaccacccggaaagccaggcccaattggtcgtatccaa
ggagtcgagggcagtgctgatttcgtgtgtccaaccaactgcccacctggactgaaggga
ccaccaggtttacaggggttgaagggtccaagaggtgatgtgggcctgtctggagaacaa
ggcagtcagggttctcctggcccagaaggtcccagggggcatccaggaatggcaggacca
aaaggggagatgggtcctcaaggttacaaaggcatgactgggagtattggagctgttggt
cccccgggtgaagatggccccaggggccccccaggacaagttggagagaagggagaaatt
ggtcctcgcggtttcagtggtgctcagggtgaaatgggccccaaaggaacacgggggctt
cctgggattgatggcaaacctggatttcctgggactccagggttgaagggaagtgtgggt
caaccaggccttcctgggcccctgggacacagaggagtggctggtttgccaggcactcct
gggagcaaaggtggtcccggagaaaagggagaaccagggacacgtggtccatcaggttta
cctgggccacctggaaaaattggagagcccggcccagcaggagcagtgggtcttcaaggc
atctctggtgtgaaaggagatcggggtgagagggggcctacgggacctccaggtccacag
gggaaagggggcgctaaaggagaccaggggccccctggaattccagggccacaaggactc
ccaggagttaaaggcagcaagggcttcccaggaaaaattggatccaaaggcaatatcggg
gattctggtgttgaaggcctttctggaggaaaggggcagaagggtgaactgggggaacct
ggaccaaagggacagcaaggcatccacggggaacctggttttcctggacctcctggagac
attggagcacctggagtccgaggctttcaaggacctcctggcccccgagggctgaatggg
gaacgtggtgtacctggaatgcctgggttgccaggtggcccaggaagggacaccggagac
cagcatattgttgaagtcgtggtcaagatgctgcaagaacaactggctgagttagctgtg
agtgcgaaaagagaaactttgggtggaagcggcgtgatgggacctcctggccctccaggg
ccccctggaccacctggctcccaaggcccccatggacatcctggttcccgtggtcttcca
ggaatcctaggagctgttggacagataggcaacactggacccaaaggaaagaggggtgag
aaaggagaccaaggagaagctggccgtggacatcaagggatgccagggcctctaggcata
ccaggtccccctggtcagcctggtcaagctctcaatggcaaacatggagagcgaggtgtt
ccaggtactccaggagaagcaggacgtcctggtttacctgggccttctggccttcctgga
ttttgtgaggcagttgtctgccttggggcctctgcctcagctcagctaactgaagtaggt
tctgtcaaaggaccttcctactga
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