Pseudonaja textilis (eastern brown snake): 113445263
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Entry
113445263 CDS
T09005
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113445263 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113445263 (CNOT1)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113445263 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113445263 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
113445263
NCBI-ProteinID:
XP_026570148
Ensembl:
ENSPTXG00000007441
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLQVFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIEAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVVFGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFC
FADYPCHTVSTEILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGPTVPHTQSVPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTSSLGIGTGNLGLPAVNNDPFVPRKLNTSGLNQPTFQQSKVKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAPAKTPLAGQVSTVVTTATTTSTVAKTAIAPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINDLKPGSLLKDKDRLKTLDEQLSAPK
KDIKQAEELPPITTTTTSTTSATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDSSQPTGILAQPMKQAWATDDVAQIYDKCMAELE
QHLQSVPHTLAMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHMTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELGEREMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaaccggcacgga
cctgaagcagataggcatttgctacgctgtctcttttctcatgtggatttcagtggcgat
ggtaaaagtagcggtaaagatttccaccagactcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaacttcatttcaacactgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccatcaccccatctattcacccagctgagcaaagtgatcaaa
ttaagcaaagttcaagaggttatttttggccttgctttgttgaactctttcaatcctgat
ctacaagtttttgctgctcagtttattaaacagaagcttcctgatcttctgcgctcatat
attgacgcagacgtcagtggtaatcaagaaggtggcttccaagatattgcaatagaagtc
ttgcacctcctcctctcccatctactttttgggcagaagggagcctttggggttggacag
gaacaaattgaggctttcctcaaaacattgcgcagagatttccctcaggagcgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagcaaaaaccatgatggagagttctcttgcagactttatgcag
gaagttggctatggcttttgtacaagcgtggaagaatgtcgcagtatcatcacacaattt
ggtgttggggaggttacagctgcccaggttgccagggttttgggaatgatggctcgcaca
cactctggattgacagatggcattccattacagtctatttctgcccctggaagtggaatt
tggagtgatggaagagataaaaatgatggaacacagactcatacatggaatgttgaagtt
ttgattgatgtgcttaaagaactgaacccaaccttaaatttcaaagaagtaacctatgag
ctggaccaccctggatttcaaattcgtgatagcaagggcctgcaaattgtagtctttgga
gttcagcgaggattaggactggaggtttttccagttgatctaatatacagaccttggaaa
catgctgaaggccagctctcattcattcagtattccctcattaacccagagatcttctgt
tttgctgactatccctgtcatactgtttccacggagatcttgaaagcaccacctgaggat
gataatcgagaaattgccacatggaagagcctagatttgattgagtccctgttgcggttg
gcagaggtgggccagtatgaacaagtcaagcagctcttcagtttccctatcaagcactgt
ccagatatgttggtcttggctttgctacagatcaacacttcttggcatactttgcggcat
gaactcatctccacccttatgcccattttccttggcaaccacccaaattctgctatcatc
ttgcattatgcatggcatgggcagggtcagtccccttcaattcgtcagctcatcatgcat
gctatggcagaatggtacatgagaggagaacaatatgaccaagcaaaattatcacgtatc
ctagatgtggcccaagacttgaaggcattgtctatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcccttgcctctcggcgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaagcttgtatgactttttta
aagagaagatgtccctctatcttgggtggtcttgctccagagaaagatcagcccaaaagt
gctcaacttccaccagagactctagcaacaatgctagcttgccttcaggcttgtgctgga
agtgtatcgcaagagctgtcggaaactattctcaccatggtagccaactgcagcaatgta
gtgaacaaagccagacagccaccgcctggcgtgatgcccaaaggacgtccccccagtgct
agcagcctggatgccatctcccctgtgcagattgatccgcttgctgctgggatggcatct
ctcagtttaggtggcccaacggttcctcatacccagagtgtgcctggatttcctccaaac
ttgagttctgcttttagtactcctcagtcaccagcaaaagcatttccaccactttctaca
caaaaccagaacacaccttttagcgggattggtgggctctcttcacagcttccagtaggt
ggtctcacaaccagtagtctgggtattggaactggcaaccttggcctccctgcagtgaat
aatgatccatttgtgccaagaaagctgaacacatcaggattgaaccaacccacattccag
cagagtaaggtgaaaccttctgacttatctcaggtatggccagaggctaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccc
catcccaccatgtctgtagatgaggtgttagaaatgctacagagatttaaggactctaac
attaaacgggagcgagaagtatttaactgtatgctgaggaatttatttgaagaatatcgt
tttttcccgcaatatcctgataaggagctccacataacagcctgcctcttcggtgggata
attgagaagggattggtgacttatatggccctgggcctggccttgcgctacgtgcttgaa
gccttacgaaagccttttacatccaaaatgtactattttggaattgctgcactagataga
tttaaaaatagattgaaggactaccctcagtattgtcaacatctggcgtctattagtcac
tttatacagttcccgcatcacctgcaggagtacattgaatatggacagcagtcgagagat
cctcctgtgaagatgcaggggtccatcaccacccctggaagtattgccctggcccaagcc
caggcccaggcccaggctccagcaaagacacctctcgctggccaggttagcactgtagtc
accactgccaccaccaccagcactgtcgcaaagacagccattgcgcctgtgggccgagtc
agcttcaagaaagatgtgccaccttctattaatacaacaaacattgatactctgctagtg
gccacagatcaaacagagaggattgtagaaccacctgaaaatgttcaggaaaagattgct
tttatctttaataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaa
actgtgaaagaagaattcatgccttgggtttcacagtatcttgtgatgaagagagttagc
attgagccaaacttccatagtctttattcaaatttccttgacactcttaaaaatccagaa
tttaataaaatggttttgaatgaaacatacagaaatatcaaggtgctgcttacatcggat
aaagctgctgccaacttctcagaccgttcgttgctgaagaacctgggtcactggctgggg
atgataacactggcaaagaataagcccatcttgcacacggatttagatgtcaaatctttg
ctgctagaagcttatgtaaaaggacagcaggaattgttatacgttgtgccatttgttgct
aaagtattggaatccagcgtaagaagtgtggttttcaggcccccaaatccatggaccatg
gcaatcatgaatgttcttgcagaacttcatcaggagcatgacttaaagctgaatctgaag
tttgaaattgaagtgctctgtaaaaacctggcccttgacatcaatgatctaaaacctggt
agtcttctaaaagacaaggaccggttgaaaaccctggatgaacaattatctgctccaaaa
aaggatataaaacaagcagaagaactaccaccaattactactaccactacttctacaact
tcagctaccagtaccacatgcacagctactgttcctccacagccacagtacagttaccat
gatatcaacgtatactccctgggagggctggctccacacattactctaaacccgactatt
cccttgttccaagcccatccacagttaaagcagtgtgtacgccaagccatagagcgtgca
gttcaagaactggttcatccagtagtggaccgctcgattaaaattgctatgactacttgt
gaacaaatagtgaggaaggattttgcgctggactcagaagagtcgcgcatgcgtgtggca
gcacatcacatgatgcggaacctgacggctggcatggccatgattacctgcagggagccc
ttgctgatgagcattgcgaccaacctgaagaacagctttgcaactgcgttgcgggcagct
tcaccacagcagagggagatgatggagcaggctgcagcccagttggctcaagataactgt
gagttggcctgctgcttcattcagaaaacagcggtggaaaaagcaggtcctgaaatggac
aagaggctggcaactgaatttgagctccgaaaacatgcccggcaagaagggcgcaggtac
tgtgatcctgtggttttgacttaccaagcagagcggatgccagagcagatcagactgaag
gttggtggtgtggacccaaagcagctagctgtatatgaagaatttgcacggaatgttcct
ggtttcctgccaacaaatgattcaagtcaaccaacaggaatcctggcccagcctatgaag
caagcctgggcaactgatgacgtggcacagatttatgataaatgcatggcagagctagag
cagcatctgcagtctgttccccacacgttggccatgaatccccagacacaagctctgcgg
agccttttggaggccgtagttgtggctcgtaattctcgagatgctattgcagcccttgga
ttgttacagaaggcggttgaaggattgttagatgctacgagtggtgcagatgcagacctc
cttctccgataccgtgaatgtcatttgcttgtattaaaagccttgcaagatggccgtgcc
tatggctctccctggtgtaataagcagataacaagatgtctgattgagtgtcgagatgaa
tataaatacaacgtagaagcagtggagctcctgattcgtaaccatctagttaacatgcag
cagtacgaccttcacctagctcagtccatggagaacggcttgaactacatggcagtggcg
tttgcaatgcagctggtgaagatcctgctcgtggacgagagaagtgtggctcacatgaca
gaagcagatttgttccataccattgaaactctgatgagaataaatgctcactccagagga
aatgctccagaagggttgccacaactaatggaagtggtacgatccaactatgaagccatg
attgatcgtgctcatggcggacccaactttatgatgcattctgggatctctcaagcctca
gaatatgatgatcctccaggtctgagggagaaggcagagtatctcctgagagagtgggtg
aatctttaccattctgcagctgctggccgggacagcaccaaagccttctctgcatttgtt
ggacaggtagaacttggggaaagagagatgcatcaacaaggaatcctaaaaactgatgac
ttaatcacaagattcttccgtctttgcactgaaatgtgtgttgaaatcagttatcgtgct
caggctgagcagcagcacaaccctgctgcaaaccccactatgatccgtgccaagtgttat
cacaacctggatgcctttgtgcgtcttattgcactgttggtgaagcactctggagaggct
accaatacagtaacaaaaatcaacctgcttaataaggttcttgggatagtggtgggagtc
cttttgcaggatcatgatgttcgtcagagtgaatttcaacaacttccctaccaccgcatc
ttcatcatgttactgttagaattaaatgctcctgaacatgtcctggaaactatcaacttt
cagaccctcacagctttctgcaatacatttcacatcctgcgacctacaaaagctccaggt
tttgtttatgcttggttagaactgatctctcatcggatatttattgcaaggatgctggca
catacaccacagcagaagggttggcccatgtatgcacaactcttgattgacctgtttaaa
tatttggctcctttcctgagaaatgtggaacttgccaagcctatgcaaattttgtacaag
ggaacactgcgtgtgttactggtattattacacgatttcccagaattcctttgtgattac
cactatggattttgtgatgtgattcctccaaactgtattcagctaaggaatctgattttg
agtgcctttccacgtaatatgaggcttcctgaccccttcactcccaaccttaaggttgac
atgctgagcgagatcaatattgctccacggatcctcaccaattttactggtgtaatgcca
cctcagttcaagaaggatttggattcctatctcaaaactcgttctccagtcacgttcctc
tccgacttgcgcagcaacttgcaggtatcaaatgagcctggcaatcgttacaatattcag
ctgatcaatgccttggtgctttatgttggcacacaagcgattgcacacattcataataag
ggcagcacaccatccatgagcaccatcacccattcagcccacatggacatcttccagaac
cttgctgtcgatctggacacagaaggtcggtacctcttcctgaatgcgattgccaatcag
ttgcgatatcccaacagccacacgcactacttcagctgcaccatgctttacttgtttgca
gaagccaatacagaagctattcaagagcagatcaccagggttttgttagaacgactgatt
gtaaataggcctcatccctggggcctcttaatcaccttcattgaattgattaaaaatcca
gcatttaaattctggaaccatgagtttgttcactgtgctccagaaattgaaaagctgttc
cagtcagtcgcacagtgttgtatggggcagaaacaggcacagcaagtaatggaaggaact
ggagccagctag
DBGET
integrated database retrieval system
