Pseudonaja textilis (eastern brown snake): 113445533
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Entry
113445533 CDS
T09005
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113445533 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113445533 (PRPF40B)
Spliceosome [BR:
ptex03041
]
Complex A
U1 snRNP components
U1 related factors
113445533 (PRPF40B)
Complex B
113445533 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
DUF4936
SelB-wing_2
PT26-6P_helical
DUF6887
Motif
Other DBs
NCBI-GeneID:
113445533
NCBI-ProteinID:
XP_026570543
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MSTPDSSSPGQPAPFPSAPRPPPPILPPPFMPPPGIPPPFPPMGLPPMGPRPPPMPPMPP
GMMPPPPMIPPMPGPPPLGQMPTMVPPMLPGMIMPGVPAGPVPVSGGGAAPVTDPSNTTV
TQAAPVIPNPLTAAMQQTVILGGSPVLDTGRKKPAWSEHKAPDGRIYYYNAETKQSSWEK
PDELKSKAEILLSHCPWREYRSETGKSYYYNTQSKESRWTRPRELDDIEALIKEEEEEAE
RQQLPQQSEAQPLLGPASPTPSSAATSDTEGTGGVEETPGTEGVPAALEEEVTSSCDPLQ
RDEEDRGSGSAWNNKEEAKQAFKELLKEKGVPASASWEQAMKLISSEPRFSALPMLSEKK
QAFNAYKAQRDKEEKEEARLRAKEAKEELQRFLEEHNKMNSTTRYRKAEQMFGELEVWAL
VPERDRKEIYDDVLFFLAKKEKEHAKQLRKRNIQALKSILDSMSRVSFQTTWSEAQQYLM
DNPSFAEDEDLQTQPGLLPTFPLSDMDKEDALICFEEHIRTLEREEEEERERGRLRERRQ
QRKNREAFQAFLDELHENGRLHSMSTWMELYPSLSTDRRFANMLGQPGSTPLDLFKFYVE
DLKARFHDEKKIIKDILKDRSFSVEVNTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLE
KAEAREREREKEETRKMRRKEAAFKSMLRLAAPPLEPNTAWDEVREQFVNNIAFEQITLE
SERIRLFREFLQLLESECQHFHTKAKKHAKKPKKHHRKHSASGSESGSDHPHRAAKRKKR
NHSESAGSGASSSPDSEHSPRRAKRQKKKSKKKRHKSNSPESEAEHKKEPSRAEEWERGK
APLRPEGRGHSPPRGTRRERSGWDTSESEELSEGELERRRRTLLQQLGDQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactccagattcaagcagtcctgggcagccagctccttttccttctgccccacgg
ccgccaccaccaattctaccccctccatttatgcctcctcctgggatcccaccaccattt
ccacccatgggattgcccccaatgggaccacggccacctcctatgcctcctatgccccct
ggcatgatgccacctccccctatgattccacctatgcctggaccaccgcccctgggtcag
atgcccacaatggtgccaccgatgctgcctgggatgatcatgccaggggtcccagctggg
cctgttcctgtttctggaggaggagcagctcctgttactgacccatccaataccacagtg
acccaagcagcacccgtgatccccaaccccctgacagctgcaatgcaacaaactgtaatt
cttggtggctctccagtgctggatacaggacgaaagaagccagcatggagtgagcataaa
gcccctgatgggcggatctattattataatgctgaaaccaaacaatcaagttgggaaaag
ccagatgaactcaagtctaaggcagagatcttgctgtctcactgtccttggcgtgagtat
cgctcagaaactgggaaatcctattactacaatactcagagcaaggagtcacgctggacc
aggccacgagagctggatgacattgaagcattgatcaaggaggaagaggaggaagcagag
aggcaacagctacctcagcaatcagaggcccaaccattgttgggccctgccagtcccacc
ccatcttccgcggccacctccgacacggaaggcactgggggtgttgaagagaccccaggg
actgagggagtcccagctgctcttgaggaagaggtcacaagcagctgtgatcccctgcag
agagatgaagaagatcgtggcagtggcagtgcctggaacaacaaagaggaagccaagcaa
gcttttaaggagctgctcaaagagaagggcgttccagctagtgcatcctgggaacaggcc
atgaagcttataagcagtgaaccccgtttcagtgctttgcccatgctgagcgagaagaag
caggcattcaatgcctacaaggctcaacgggacaaggaagaaaaagaagaggcccggctg
cgggccaaggaggcaaaggaagaactgcagcgcttcttggaagaacacaacaaaatgaat
tctaccacccgctacagaaaagctgagcagatgtttggtgagctagaagtgtgggctctg
gtgcctgaaagggatcgcaaggagatctatgatgacgttcttttttttctggccaagaaa
gagaaggagcatgccaagcagctccgcaaaaggaacattcaagcgctgaagagtatcctt
gatagcatgagccgtgtcagcttccagaccacttggtctgaagcccagcagtatctaatg
gacaaccccagctttgccgaagacgaagacttgcaaactcagcctggcctgctcccaact
ttccctctttcagacatggacaaggaggatgccttaatctgctttgaggaacacatccgg
acgttggagagggaggaagaggaggagcgtgaacggggtcgattacgggagaggcgtcag
cagaggaagaacagggaagccttccaggccttcttggacgagcttcacgaaaacgggcgc
cttcactccatgtccacttggatggagctgtatccctccctcagcaccgaccgacgcttt
gccaacatgttgggccagcctggctccaccccgctcgatctctttaaattctacgttgaa
gacctgaaggcccggttccatgacgaaaaaaagataatcaaggatattctcaaggaccgg
agcttcagtgtagaagtaaatacaacctttgaggacttcgctcacgtcatcagttttgac
aagcgtgctgctacgctggatgctggcaacataaagttaactttcaacagcctgctggaa
aaggctgaggcacgggagcgtgaacgagaaaaggaggaaacccggaagatgcggcggaag
gaggccgccttcaagagcatgttgcgtctggcagctcctcccctggagcccaatactgcc
tgggatgaggtcagagagcagtttgtcaacaatattgcgtttgagcagatcacactcgaa
tcggaacggatccgcctctttcgtgaattcctgcagttgctggagagtgagtgccagcat
ttccacacgaaggccaagaagcatgccaagaagccaaagaaacatcatcgcaaacactct
gcctcgggctcagaatcgggctcagatcatccccaccgagcagccaagcggaagaaacga
aaccactcggaatccgcaggttccggggcctcatcttcacctgactcagagcacagcccc
aggcgtgccaagaggcagaagaagaagagcaagaagaaacgccacaagtcgaacagccct
gaaagcgaagctgagcacaagaaggagccaagccgggcagaagagtgggagcgagggaag
gcgcctctgcgacctgaggggaggggccactcccctccccggggcactcggagggagcgg
agtggttgggacacctcagagagcgaggagctgagcgaaggggagctggaacgtcggcgt
cggactctgctgcagcaactgggtgaccagtaa
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