Panthera tigris altaica (Amur tiger): 102950274
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Entry
102950274 CDS
T02988
Symbol
SCN5A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 5
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102950274 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptg04040
]
102950274 (SCN5A)
Ion channels [BR:
ptg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102950274 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
VIR_N
Motif
Other DBs
NCBI-GeneID:
102950274
NCBI-ProteinID:
XP_015392532
LinkDB
All DBs
Position
Un
AA seq
1879 aa
AA seq
DB search
MAGFLLPRGTGSFRRFTRESLAAIEKRMAEKQARGSAASQESREGLPEEEAPRPQLDLQA
SRKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPI
RRAAVKILVHSFFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALVGLQLFMGNLRHKCVRNFTALNDTNGSVEADGLV
WKSLDLYLNDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALAIRGVDTVSRSSLEMSPLAPVTHERRHKRSKR
MSSGTEECGDDRFPKSDSEDGPRAMNRLSSAHGLSRTSVKPRSSRGSIFTFRRRDLGSET
DFADDENSTAGDSESHRTSLLVPWPLRRPSAQGQPSPGTSALSHALNGKRNSTVDCNGVV
SLLGTGDPEATSPGSRLFRPVMLDRPPDTTTPSEEPGRPQMLNPHAPRADGFEGPGERQR
ALSAVSVLTSALEELEESHRKCPPCWTRFAQRYLIWECCPLWMSIKQRVKFMVMDPFADL
AITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQGW
NIFDSVIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMMDFFHAFLIIFRILCGEW
IETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDDDGEMNNL
QLALARIQRGLRFLKRTTWDFCCGLLQRGPQKPTALAAHGQPPRCVATSSSPPPPPPEPE
KAPPARKETRFEEDKRPGQGTPGDTEPVCVPIAVAESDTDEQEEDEENSLGTEEESSKQG
SQPRSEQLPQQERDGGRRQATPKGQPHTGASVAEADWRQQRRVEPPAPGCSETQEDSYSE
GSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCAVDTTQAPGKVWWRLRKTC
YRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKW
VAYGFKKYFTNAWCWLDFLIVDVSLISLAANTLGFAEMGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIV
NNKSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGFEEQP
QWEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVN
ILAKINLLFVAIFTGECIIKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSELIQKYFFS
PPTLNTGPPSCDPNLPNGNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSV
ATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSALSDFADALSEPLRIAKPNQISLIN
MDLPMVSGDRIHCMDILFAFTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLR
RKHEEVSATIIQRAFRRHLLQRSMKHASFLFRQQAGSSGLSEEDAPEREGLIAHVMNENF
SRRRGPPSTSSSSSPPSYD
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcttcctgttacctcggggcaccggcagcttccgcaggttcacccgggagtcc
ctggcggccatcgagaagcgcatggcggagaagcaagcccggggctcggccgcctcgcag
gagagccgggaagggctgcccgaggaggaggctccccggccccagctggacctgcaggcc
tccagaaagctgccggatctctacggcaacccgccccgagagctgatcggggagcccctg
gaggacctggaccccttctacagcacccaaaagaccttcatcgtgctgaataaaggcaag
accatcttccggttcagtgccacgaatgccttgtatgtcctcagtcccttccaccctatc
cggagagcggctgtgaagattctggttcattcattcttcagtatgctcatcatgtgcacc
atcctgaccaactgtgtgttcatggcccagcacgaccccccgccctggaccaagtatgtt
gagtacaccttcactgccatttacacctttgagtctctggtcaagattctggctcgaggg
ttctgcctacacgcgttcaccttccttcgggacccatggaactggctagacttcagtgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcggctttacgtacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggtctgaagaccatcgtg
ggggccctgatccagtccgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagtgtcttcgccctcgtcggcctgcagctcttcatgggcaacctgaggcacaagtgt
gtccgcaacttcacggcgctcaacgacaccaacggttccgtggaggccgacggcctggtc
tggaagtcgctggacctctacctcaacgacccagaaaattacttgctcaagaatggcacc
tccgacgtgttactgtgtgggaacagctctgatgccgggacgtgcccagagggttaccgc
tgcctgaaggcgggagagaaccctgaccacggctacacgagcttcgactccttcgcctgg
gccttcctcgccctcttccgcctgatgacgcaggactgctgggaacgcctctaccagcag
accctgaggtctgcagggaagatctacatgatcttcttcatgctggtcatcttcctgggc
tccttctacctggtgaacctgatcctggctgtggttgccatggcctacgaggagcaaaac
caagccaccatcgccgagaccgaggagaaggaaaagcgtttccaggaagccatggagatg
ctcaagaaggagcatgaggccctcgccatcaggggtgtggataccgtgtcccgcagctcc
ttggagatgtcccctttggccccagtaacccatgaaagaagacacaagaggagcaaacga
atgtcttcagggacagaggagtgtggagatgacaggttccccaaatccgactcggaggac
ggtcccagagcaatgaaccgtctgagcagcgcccatggcctcagcaggacctccgtgaag
ccacgctccagccgtgggagcattttcacctttcgcaggcgagacctgggctcggagaca
gattttgcagatgatgaaaacagcacagcgggggacagcgagagccaccgcacgtcactg
ctcgtgccgtggcctctgcgccggcctagtgcccagggacagcccagtcccgggacttcg
gctctcagccacgccctcaacggtaaaaggaacagcaccgtggactgcaacggagtggtc
tccttgctggggacaggcgaccctgaggccacctccccggggagccgcctgttccgccct
gtgatgctggatcgccccccagacacgaccaccccgtcagaggagccgggcaggccccag
atgctgaacccccacgctccacgtgccgatggcttcgagggaccaggagagcgacagcgg
gcgctcagcgcagtcagtgttctcaccagcgccctggaagagttggaagagtctcaccgc
aaatgtccaccatgctggacccgcttcgcccaacgctacctgatctgggaatgctgcccg
ctgtggatgtccatcaagcagagagtgaagttcatggtcatggatccgttcgccgacctc
gccatcactatgtgcatcgtgcttaacacgctcttcatggcactggagcactacaacatg
acaactgaattcgaggagatgctgcaggttggaaacctggtcttcacggggatcttcacg
gcagagatgaccttcaagatcatcgctctggacccctactactacttccagcagggttgg
aacatcttcgacagcgtcattgtcatcctgagcctcatggagctgggcctgtcccgcatg
ggcaacctatcagtgctgcgctccttccgcctgctgcgtgtcttcaagctggccaagtcg
tggcccacgctgaacaccctcatcaagatcatcgggaactcagtgggggcgctggggaac
ctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctcttt
ggcaagaactactcagagctgaggcaccgcatcagcgactcgggcctgctgcctcgctgg
cacatgatggacttcttccacgcctttctcatcatcttccgcatcctctgtggggagtgg
atcgagaccatgtgggactgcatggaggtgtccggccagtcactgtgcctgctggtcttc
ttgctcgttatggtcattggcaaccttgtggtcctgaacctcttcctggctttgctgctc
agctccttcagtgcagacaacctcacggcccccgacgacgacggggagatgaacaacctc
cagctggccctggcacgcatccagcgtggcctgcgcttcctcaagcggaccacctgggac
ttctgctgtgggctccttcagcgggggcctcagaagcccacggcccttgccgcccacggc
cagccaccccgctgtgtggccacctccagctccccacccccaccgcccccagagccagag
aaggcgcctccggcccgcaaggagacacggtttgaggaagacaagcggccaggccagggc
accccgggggatacagagcctgtgtgtgtgcccattgccgtggctgagtcagacacagat
gagcaagaggaggacgaggaaaacagcctgggcacagaggaagagtccagtaagcaggga
tcccagcctcgctcagagcagctgccccagcaggaacgggatggaggtagacgacaggcc
actcccaaagggcagcctcacacaggggcgagtgtggctgaggcagactggcggcagcag
cggagagtggagcccccggccccagggtgcagtgagactcaggaggacagttactcggaa
gggagcacagcagacatgaccaacactgctgacctcctggagcagatccctgacctgggt
gaggatgtcaaggacccagaggactgcttcaccgaaggctgcgtccggcgctgtccttgc
tgcgccgtggacaccacgcaggccccggggaaggtctggtggcggctgcgcaagacctgc
tatcgcatcgtggagcacagctggttcgagacattcatcatcttcatgatcctgctcagc
agcggagcactggccttcgaggacatctacctagaggagcggaagaccatcaaggttctg
ctggagtatgctgacaagatgttcacctacgtcttcgtgctggagatgctgctcaagtgg
gtggcctacggcttcaagaagtacttcaccaacgcctggtgctggctggacttcctcatc
gtggacgtctcgctgatcagcctggcggccaacaccctgggcttcgcagagatgggcccc
atcaagtccctgaggacgttgcgtgctctccgacccctgcgagccctgtcccgatttgag
ggcatgagggtcgtggtcaatgccctggtgggcgccatcccctccatcatgaacgtcctc
ctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctctttgcgggg
aagtttgggcggtgcatcaaccagactgaaggagacctgcccttgaactacaccatcgtg
aacaacaagagtgactgtgagtctttcaatgtgactggcgaattgtactggaccaaggtg
aaagtcaactttgacaacgtaggggccgggtacctggcccttctgcaggtggcaacattt
aaaggctggatggacattatgtatgcggctgtggactccagggggtttgaagagcagccc
caatgggaatacaacctctacatgtacatctacttcgtcatttttatcatcttcgggtct
ttcttcaccctgaaccttttcatcggtgtcatcattgacaacttcaaccaacaaaagaaa
aagttagggggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatg
aagaagctgggctccaagaagccccagaagcccatccctcggcccctgaacaagtaccag
ggcttcctgtttgacattgtgaccaagcaagccttcgatgtcaccatcatgttccttatc
tgcttgaacatggtgaccatgatggtggagacagatgaccagagccccgagaaggtcaac
atcttggccaagatcaacctgctcttcgtagccatcttcacaggcgagtgtatcatcaag
atggccgccctgcgtcactattatttcaccaacagctggaacatcttcgacttcgtggtt
gtcatcctctccatcgtgggcactgtgctctcagagctcatccagaagtacttcttctcc
ccccccaccctcaacacggggcccccctcctgcgaccccaacctgcccaacggcaacggc
tcccgggggaactgcgggagcccggccgtgggcatcctcttcttcaccacctacatcatc
atctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagtgtg
gccacggaggagagcactgagcccctgagcgaggacgacttcgacatgttctatgagatc
tgggagaagttcgacccggaggccacccagttcatcgagtactcggccctgtccgacttc
gccgatgccctgtctgagccgctgcgcatcgccaagcccaaccagataagcctcatcaac
atggacctgcccatggtgagcggggaccgtatccactgcatggacatcctcttcgccttc
accaagagggttctgggcgagtccggggagatggacgccctgaagatccagatggaggag
aagttcatggcggccaacccgtccaagatctcctacgagcccatcaccaccacgctgcgg
cgcaagcacgaggaggtgtcggccaccatcatccagcgggccttccggaggcacctgctg
cagcgctccatgaagcacgcctccttcctcttccgccagcaggcgggcagcagcggcctc
tccgaagaggacgcccccgagcgagagggcctcatcgcccacgtgatgaacgagaacttc
tcccggcgccgcggcccgccctccacgtcctcctcgtcctctccgccctcctatgac
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