Panthera tigris altaica (Amur tiger): 102960605
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Entry
102960605 CDS
T02988
Symbol
CRNKL1
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102960605 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptg03041
]
102960605 (CRNKL1)
03036 Chromosome and associated proteins [BR:
ptg03036
]
102960605 (CRNKL1)
Spliceosome [BR:
ptg03041
]
Complex B
Other components
Prp19-related factors
102960605 (CRNKL1)
Complex C
102960605 (CRNKL1)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102960605 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
102960605
NCBI-ProteinID:
XP_007099302
UniProt:
A0A8C9M374
LinkDB
All DBs
Position
Un
AA seq
687 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHGYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRR
LLQRTQHVKVWISFAQFELSSGKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAAEQDPDKDIDESES
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaccgcagccgggaaacagaggattcccaaagtggccaaggtgaaaaac
aaagccccggctgaggtacagataactgccgaacaactcttaagagaagctaaagaaaga
gaacttgaacttcttccgcctccacctcaacagaagatcacagatgaagaagagttaaat
gattacaaactaaggaaacggaagacttttgaagataacataagaaaaaacagaactgtg
attagtaactggataaaatatgcacaatgggaagagagtctaaaggagattcaaagggct
cgatccatatacgaacgtgctttagatgtagactaccgaaatattacactctggctgaaa
tacgcagaaatggaaatgaagaatcgccaggtcaaccatgcccgaaatatctgggaccgg
gccataacaactctgcctcgagtcaaccagttctggtacaagtacacgtacatggaagag
atgttggggaacattgctggcgcccggcaggtgtttgagcgctggatggagtggcagcct
gaggagcaagcctggcactcctacatcaactttgagctacgatacaaagaggtggatcgg
gcccgcaccatttacgagcgatttgttctcgtgcaccctgatgttaagaattggatcaag
tatgcccgctttgaagaaaaacatggttattttgcccatgcacggaaagtgtacgagaga
gccgttgaattctttggagatgaacatatggatgaacacctttatgttgcctttgccaaa
tttgaagaaaatcagaaagaatttgaaagggtacgggtcatctacaagtatgccctggat
aggatttcaaagcaggaggcccaagaactctttaaaaattataccatcttcgagaagaaa
tttggtgataggcggggtattgaagacatcattgtgagcaaacgaagattccagtatgag
gaagaggtgaaggctaatccacacaattacgatgcgtggtttgactacttgcgcttggtg
gaaagtgatgccgaagcagaaactgttcgagaagtgtatgaaagagccattgccaatgtg
ccacccattcaagagaagcggcactggaagcgctacatctatctgtgggtcaactatgcg
ctctatgaggaattggaggcaaaggatcctgagaggacgagacaggtatatcaagcttct
ttggaattaatccctcataaaaagttcacatttgccaagatgtggttactatacgcacaa
tttgaaataagacagaaaaatttaccatttgccagaagagctttgggaacttccataggc
aaatgcccaaagaacaagttatttaaaggttacatagaattggagctgcagcttcgagaa
tttgacagatgccggaagctttatgagaagttcttggaatttggacctgaaaattgtacc
tcttggattaagtttgcagagttagagacaatccttggtgatattgagagagcccgggca
atctatgagttagccatcagtcagccacgcttagacatgccggaggtgctttggaaatca
tatattgactttgaaattgagcaggaagaaactgagagaacacgaaatctttaccgacga
ttgcttcagcgaacacagcatgtcaaggtatggatcagctttgcccagtttgagctgtct
tcagggaaagaaggaagtttggctaaatgcagacaaatttatgaagaggctaacaaaacc
atgagaaactgcgaagaaaaggaagagagacttatgttgctagaatcatggcgaagcttt
gaagatgaatttggaacagtatcagataaggagagagtagacaaactcatgccagagaaa
gtcaagaaaagaagaaaggtccaggctgatgatgggtctgatgcaggctgggaagagtat
tatgattacatctttcccgaagatgctgccaaccaacccaacctcaagctcctggccatg
gccaaactttggaagaaacagcaacaggaaaaggaggctgctgagcaagacccagataag
gacattgatgagagtgaatcctga
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