Panthera tigris altaica (Amur tiger): 102960795
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Entry
102960795 CDS
T02988
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102960795 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptg03041
]
102960795 (PRPF40A)
Spliceosome [BR:
ptg03041
]
Complex A
U1 snRNP components
U1 related factors
102960795 (PRPF40A)
Complex B
102960795 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
102960795
NCBI-ProteinID:
XP_007078563
LinkDB
All DBs
Position
Un
AA seq
983 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSTAHSDWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAK
SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEETSKQEECTTTSTAPVPTTE
IPTTMSTMAAAEAAAADASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEE
QAQLTSTPAVQDQSMEVSSNTGEETAKQEAVADFTPKKEEEESQPAKKTYTWNTKEEAKQ
AFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARS
KYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKK
EKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDAL
ICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYP
TISSDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNT
TFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSML
KQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKH
SKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKK
KSKKRRHKSDSPESDAERDKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSG
SELSEGELEKRRRTLLEQLDDDQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggctgaggctgggggcgaatcgccgaagagctgcgtgtcg
acagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagctgagcgtggaggcctcatgatggggcaccctggcatgcattat
gccccaatgggaatgcaccctatgggtcagagagccaatatgcctcctgtacctcatgga
atgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcctggaatg
atgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaagcttccatgcagcct
gccttaccgccaggagtaaataatatggatgtagcagctggtacagcatctggtgcaaaa
tcaatgtggaccgaacataaatcacctgatggaaggacttactactacaatactgaaaca
aaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaacttttatct
aaatgtccctggaaggaatacaaatctgactctggaaaaccttactattataattctcaa
acaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggataccagaat
accattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaa
gaaaccagtaagcaagaagagtgcaccacaacatcaacagccccagttcctacaaccgaa
attccgaccacaatgagcaccatggctgccgcagaagctgcagccgccgatgccagtgct
tccacctctgcttctaatactgtgggtggaactgttccagttgttcctgagcctgaggtt
acttcgattgttgctactgttgtagataacgaaaatacagtaacaatttcaactgaagaa
caagcacaacttactagtactcctgctgttcaggatcagagtatggaagtatccagtaat
actggagaagaaacagctaagcaggaagcagtagctgattttactcccaaaaaagaagag
gaggaaagccaaccagcaaaaaaaacctatacttggaatacaaaggaggaggcaaagcaa
gcatttaaagaattattaaaagaaaagcgagtaccatctaatgcttcatgggaacaagct
atgaaaatgatcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaag
caggcctttaatgcttacaaagtccagacagagaaagaagaaaaagaagaagcaagatcg
aaatacaaagaagctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgact
tccacaaccagatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgca
atatcagaacgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaa
gaaaaggagcaagcaaagcagttacgaaagagaaattgggaagccttaaaaaacatactt
gacaacatggctaatgtaacatactctactacgtggtctgaagcacagcagtatctgatg
gataatccaacctttgcagaagatgaggaattgcagaacatggataaagaagatgcatta
atttgctttgaagaacacatccgagctttagaaaaggaagaagaagaagaaaaacaaaag
agtttgctgagggaaaggagacgacagcgtaaaaatagagaatcttttcagatattttta
gatgaactgcatgaacatggacaactgcattctatgtcatcttggatggaattgtatcca
acaattagttccgacatcagattcactaatatgcttggtcagccggttttttcattagga
tcaactgcacttgaccttttcaagttttatgttgaggatcttaaagcacgttatcatgat
gagaagaagatcataaaagacattttaaaggataaaggatttgtagttgaagtgaatact
acttttgaagacttcgtggccataatcagttcaactaaaagatcaaccacattagatgcc
ggaaatattaagttggctttcaatagtttactagaaaaagcagaagcccgtgaacgtgaa
cgagaaaaagaggaggctcggaagatgaaacgaaaagaatctgcgtttaagagtatgttg
aaacaagctactcctccaatagaattggatgctgtctgggaagatatccgggagagattt
gtaaaagagccagcatttgaggatataactctagagtctgaaagaaaacgaatatttaaa
gattttatgcatgtgcttgagcatgaatgtcaacatcatcattcaaagaacaagaaacat
tctaaaaaatctaaaaaacatcacaggaagcgttcccgctctagatcggggtcagattca
gatgatgatgacagccactcaaagaaaaaaagacagcgatcagagtctcggtctgcttca
gaacattcttctagtgctgaatctgagagaagttataagaagtcaaaaaaacataagaag
aaaagcaagaagaggagacataaatctgactctccagagtctgatgctgagcgagacaag
gataaaaaagaaaaagaccgagaaagtgaaaaagacagaactagacaaagatcagaatca
aaacacaaatcacctaagaaaaagactggaaaggattctgggaattgggatacttctggc
agtgagctgagtgaaggggaattggaaaagcgcagaaggacccttctggagcaactggat
gatgatcaataa
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