Panthera tigris altaica (Amur tiger): 102972008
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Entry
102972008 CDS
T02988
Symbol
PTCH1
Name
(RefSeq) patched 1
KO
K06225
patched 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04024
cAMP signaling pathway
ptg04340
Hedgehog signaling pathway
ptg04360
Axon guidance
ptg05200
Pathways in cancer
ptg05205
Proteoglycans in cancer
ptg05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102972008 (PTCH1)
04024 cAMP signaling pathway
102972008 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102972008 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102972008 (PTCH1)
05205 Proteoglycans in cancer
102972008 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
102972008 (PTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
102972008
NCBI-ProteinID:
XP_007089071
LinkDB
All DBs
Position
Un
AA seq
1296 aa
AA seq
DB search
MFNPQLMIQTPKEEGANVLTTEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT
ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWTNFDPLEFLEELKKI
NYQVDSWEEMLNKAQVGHGYMDRPCLNPADPDCPATAPNKNATKPLDVALVLNGGCHGLS
RKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK
AAAILEAWQRTYVEVVHQSVAPNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA
YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG
VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR
AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYT
ETHDNTRYSPPPPYSSHSFTHETQITTQSPAYDPHTHVYYTTAEPRSEISVQPVTMTQDT
LSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFL
FLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQ
HLLYDLHKSFSSVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNG
SDDGVLAYKLLVQTGSRDKPIDISQLTKRRLVDADGIINPSAFYIYLTAWVSNDPVAYAA
SQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRT
ICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCAVFLLNPWTAGII
VTVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAV
LALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLS
FFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHANNGSDSSDSEYSSQTTVSGISE
ELRHYEAQQGTRGPAHQVIVEATENPVFARSTVVHPEARHHPPSNPRQQPHLDSESLPPG
RPGQQPRREPPREGSRPPPYRPRRDAFEISTDGHSGPSNRDRAGPRGARSNNPRHPAFTA
MGSSVPSHCQPITTVTASASVTVAVHPPPAPGPGSGRNPRGGLCPGYGDYSETDHGLFED
PHVPFNVRCERRDSKVEVIELQDVECEERPRGRSSN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcctcagctcatgattcagaccccgaaagaagaaggtgctaacgtcctgacc
acggaagctctccgacaacacctggactccgccctccaggccagcagagtccatgtatat
atgtacaacaggcagtggaaattggaacatttgtgttacaaatctggagaacttatcaca
gaaacaggttacatggatcagataatagaatatctttacccttgtttaattatcacacct
ttggattgcttctgggaaggggcaaagttacagtctgggacagcgtacctactaggtaag
cctcctttgcagtggacaaactttgaccctttggaattcctagaagagttaaagaaaata
aactatcaagtggacagctgggaggaaatgctgaataaggcccaagttggtcatggttac
atggaccggccctgcctcaacccggctgatccagactgccctgccacagctcccaacaaa
aatgcaaccaaacctcttgatgtggcccttgttttgaacggtggatgtcatggattatcc
agaaagtatatgcactggcaggaggaactgattgtgggtggcacagtcaagaatagcact
gggaagcttgtcagtgcccatgccttgcagaccatgtttcagttaatgactcccaagcaa
atgtacgaacacttcaaggggtacgagtatgtgtcacacatcaactggaacgaggacaag
gcagcagccatcctggaggcttggcagaggacgtacgtggaggtagttcatcaaagtgtc
gccccaaactccacacagaaggtgctttcctttaccacgacgaccctggacgacatcctc
aagtccttttctgatgtcagtgtcatccgagtggccagtggctacttactgatgcttgcc
tatgcctgtttaaccatgctgcgctgggactgctccaagtcccagggtgccgtggggctg
gctggcgtcctgttggttgcactgtcagtggctgcaggattgggcctgtgctcattgatc
gggatttcctttaacgctgcaacaactcaggttttgccatttcttgctcttggtgttggt
gtggatgatgttttccttctggcacatgcatttagtgaaacaggacagaataaaagaatc
ccttttgaggacaggactggggagtgcctcaagcgcacaggagccagcgtggccctcaca
tccatcagcaacgtcactgccttcttcatggctgcattgatcccgattcccgctctgcgg
gcgttctctctacaggcggctgtagtagtggtattcaattttgctatggttctgctaatt
tttcctgcaattctcagcatggatttgtatcgacgggaagacaggagattggatattttc
tgctgttttacaagcccctgcgtcagcagagtgattcaggttgaacctcaggcctacacg
gagactcacgataacacccgctacagccccccgcccccctacagcagccacagcttcacc
cacgaaacccagatcaccacgcagtccccagcatacgacccccacacgcatgtgtactat
accactgctgaaccacgctctgagatctccgtgcagcccgtcaccatgacccaggatacc
ctcagttgccagagccccgagagcaccagctccacgagggatctgctttcccagttctca
gactccagccttcactgccttgagcccccctgcaccaagtggacactttcatcttttgcc
gagaaacactatgctccttttctcttgaaaccaaaagccaaggtcgtggtgatcttcctt
ttcctgggcttgctgggggtcagcctttatgggaccacccgagtgcgcgatgggctggac
cttacagacattgtgcctcgggaaaccagagaatatgactttattgctgcacagttcaaa
tacttttctttctacaacatgtatatagtcacccagaaagcagactacccaaatatccag
cacttactctacgaccttcacaagagtttcagcagcgtgaagtatgtcatgttggaagaa
aataaacagcttcccaaaatgtggctgcactacttcagagactggcttcaaggacttcag
gatgcatttgacagtgactgggaaactgggaaaatcatgccaaacaattacaaaaatgga
tccgatgatggagtccttgcctacaaactcctggtgcaaactggcagccgtgataaaccc
atcgacatcagtcagttgaccaaacggcgcctggtggatgcagacggcatcatcaacccc
agtgctttctacatctatctgaccgcctgggtcagcaatgaccccgtggcttatgccgcc
tcccaggccaacatccggcctcaccgtcctgagtgggtgcacgacaaagctgactacatg
ccagaaaccaggctcagaatcccagcagcggagcccattgaatacgctcagttccctttc
tacctcaacggcttgcgggacacctcagacttcgtggaagcaatcgaaaaggtcagaacc
atctgcaacaactacacgagcctggggctctccagctaccccaacggctaccccttcctc
ttctgggagcagtacatcggcctccgccactggctcctgctatccatcagcgtggtgctg
gcctgcacgttcctcgtgtgcgccgtcttcctcctgaacccctggacggccgggatcatt
gtgacggtcctggctttgatgacggtcgagctctttggaatgatgggcctcattggaatc
aagctgagtgctgtgcctgtggtcatcctgatcgcttccgtgggcatcggagtggagttc
accgttcacgttgctctggccttcctaacagccattggtgataagaaccgcagggccgtg
cttgccctggagcacatgtttgcacctgtcctggatggcgctgtctccactctgctggga
gtgctcatgctggcaggatctgagtttgatttcattgtcaggtatttctttgctgtcctg
gcaatcctaacaatcctgggtgttctcaatggactggttttgcttccagtcctgctgtcc
ttctttggaccgtatcctgaggtgtctccagccaatgggctgaaccgactgcccacccct
tcccctgagccgccccccagcgtggtccggtttgccgtgccccccggtcatgcaaacaat
gggtccgattcctctgactcagagtacagttctcagacgacagtgtcgggcatcagcgaa
gagcttcggcactatgaggcccagcagggcaccaggggccctgcccaccaagtgatcgtg
gaagccacagaaaaccctgtgtttgcccgctctacagtggtccatcccgaagcgagacat
cacccaccctcaaaccctcgacagcagccccacctggactcagagtccctgcctccagga
cggccaggccagcaaccccggagagaaccccccagagaaggctcacggccacccccctac
agaccacgcagagacgcttttgaaatttctactgacgggcattctggccctagcaatagg
gaccgtgcgggcccccggggagcccgttctaacaaccctcggcacccagcattcactgcc
atgggcagctctgtgcccagccactgccagcccatcaccactgtgacggcctcggcgtcc
gtgactgttgccgtgcacccaccgcctgcccccgggcccgggtccggtcggaacccccga
gggggtctctgcccgggctacggggactactctgagactgaccacgggctgtttgaggac
ccccacgtgccttttaacgtccggtgcgagaggagggattccaaggtggaagtcatagag
ctgcaggacgtggaatgtgaggagaggccccggggcaggagctccaactga
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