Providencia stuartii 2017-45-35: OI982_14530
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Entry
OI982_14530 CDS
T09168
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ptha
Providencia stuartii 2017-45-35
Pathway
ptha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OI982_14530 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptha03021
]
OI982_14530 (rpoB)
03400 DNA repair and recombination proteins [BR:
ptha03400
]
OI982_14530 (rpoB)
Enzymes [BR:
ptha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OI982_14530 (rpoB)
Transcription machinery [BR:
ptha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OI982_14530 (rpoB)
DNA repair and recombination proteins [BR:
ptha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OI982_14530 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
WIJ72714
LinkDB
All DBs
Position
2993665..2997693
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPDGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLIVYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMDYSTEDILNLFFDKTVFQIRDNKLMMT
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRLLEKEEVNSIEVPVEYIAGKVVARD
YIDESTGELICAANMELSLDMLARLSQAGHKTIETLFTNELDHGAYISETLRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFDNLFFSEDRYDLSAVGRMKFNRSLGRDEIEGSGIL
SEEDIIDVMRKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRLVRDGIVT
DEIHYLSAIEEGNFIIAQANTVLAEDGSFVEELITCRNRGESSLFSRDQVEYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEETQLRDAKKDL
TEELRIFEAGIFARIRSVLISGGIEAEKLDKLPRDRWLELSLADEEKQNQLEQLAEQYDE
LKSEFEKKLDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PVEDMPYDENGNPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGDDPRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKEIEIKELLK
LGGLPTSGQITLFDGRTGEKFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGSHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gtgttggatgtaccttatctcctttctatccaacttgactcgttccagaagtttatcgag
caagatcctgatggtcagaacgggctggaagcagctttccgttctgtgtttcctattcag
agctacagcggtaatgctgaactgcaatatgtcagctatcgtctgggtgagcctgttttt
gatgttaaagaatgtcaaatccgtggcgtcacatactctgcaccactgcgtgttaagctg
cgcctcattgtttatgagcgtgaagcaccagaaggcactgtaaaagacatcaaagaacaa
gaagtctacatgggtgaaattccactcatgaccgaaaacggaaccttcgttatcaacggt
actgagcgtgttatcgtttctcagttacaccgtagccctggtgtgttcttcgacagcgac
aaaggtaaaacacactcctcaggtaaagtcctgtacaacgcgcgtattatcccttaccgc
ggttcatggcttgatttcgaattcgatccgaaagataacctgtttgtacgtatcgaccgt
cgccgtaaattacctgcgaccattattctacgtgcaatggattacagcaccgaagacatt
ctgaacttgttcttcgacaaaactgtattccaaatccgtgataacaagctgatgatgacg
ctggttcctgagcgtctacgtggtgaaactgcttcatttgatatcgaagcaaacggcaaa
gtctatgttgaaaaaggccgtcgtatcactgcacgtcatatccgcttgctagaaaaagaa
gaagtcaacagcattgaagtgcctgttgaatatatcgcgggtaaagtagtcgcaagagat
tacattgatgaaagtactggcgagctgatttgtgcagctaacatggaactttcattagat
atgttggcacgtctgagccaagcgggtcataaaacaattgaaacattgtttaccaacgaa
ttagaccacggtgcttacatttctgaaaccctgcgtgtcgatccaacaaatgaccgcctg
agcgcgctggtagaaatctaccgtatgatgcgccctggtgagccaccaacacgtgaagcg
gctgaaaacctgttcgataacctgttcttctcagaagatcgttacgacttgtctgcggta
ggtcgcatgaagttcaaccgttcactgggccgcgatgaaatcgaaggttctggtatcctg
agtgaagaagacatcattgatgttatgcgtaagctcatcgatatccgtaacggtaaaggc
gaagtcgacgatattgaccacttaggtaaccgtcgtattcgttctgttggtgaaatggca
gaaaaccagttccgtgtcggtctggtccgtgttgagcgtgcagtgaaagagcgtctttct
ctgggcgacctcgatgcattgatgccacaagatatgatcaacgcgaagccaatttctgcg
gcagtgaaagagttctttggttccagccagttgtctcaatttatggaccaaaacaaccca
ctgtcagaaatcacacacaaacgtcgtatctcagcgttaggcccaggcggtctgactcgt
gagcgtgcgggctttgaagtacgtgacgttcacccaactcactacggtcgtgtttgtcca
atcgaaacccctgaaggtccgaacatcggtctgattaactcattgtctgtttatgcacag
actaacgagtatggtttcctagaaacaccttaccgtttagtgcgcgatggtatcgttact
gacgaaattcactatctgtcagcaattgaagaaggtaacttcatcattgctcaggcaaac
accgtattggcggaagatggtagcttcgttgaagaactgatcacttgtcgtaaccgtggt
gaatcaagcttgttcagccgcgatcaagttgaatatatggacgtttcgacgcaacaggtt
gtttctgttggtgcgtcactgatcccattccttgaacacgatgatgctaaccgtgcattg
atgggtgcgaacatgcaacgtcaagcggttccaactttacgcgctgataaaccattagtg
ggtacaggtatggaacgtgcggttgctgttgactccggtgtaacagcagttgcaaaacgc
ggtggtacagttcagtacgttgatgcttctcgtatcgttattaaagttaatgaagatgag
atgtatccgggtgaagctggaatcgatatttataacctaaccaaatatacccgttctaac
cagaacacctgtattaaccagatgccttgtgtatctttaggtgaaccagttgaacgtggt
gacgtgttagctgatggtccttcaactgacctaggtgaattggcacttggccaaaacatg
cgcgtggcattcatgccatggaatggttataacttcgaggactccatcctcgtttctgag
cgtgttgttcaagaagaccgttttacaaccatccatattcaggaactctcttgtgtgtct
cgtgacaccaaactggggcctgaagaaattactgctgatattcctaacgtcggtgaagcg
gcactctctaaactcgatgagtctggtatcgtgtacatcggtgctgaagttaaaggcggc
gatatcctagttggtaaagtgacgccgaaaggcgaaacccaactgacaccagaagagaaa
ttgctacgtgcaatctttggtgaaaaagcgtctgacgttaaagactcttctctacgcgtt
cctaacggtgtttctggtacggttattgacgtacaagtatttacccgtgatggcgtagaa
aaagacaagcgtgcgctggaaatcgaagaaacacaattacgtgatgctaagaaagactta
actgaagagttacgtattttcgaagccggtatatttgctcgtatccgttctgtattgatc
agtggcggaattgaagcagagaaactggacaaactgcctcgcgatcgctggttagagctg
tctctggctgatgaagagaaacagaaccagttagagcaacttgctgagcagtacgatgag
ctgaaatctgagtttgagaaaaaactcgatgctaagcgtcgtaagatcacccaaggtgat
gatctggctccaggcgtactgaaaattgttaaggtttatctggctgttaaacgtcagatc
caaccgggtgataaaatggcgggtcgccatggtaacaagggtgttatctcaaaaatcaac
ccagttgaagacatgccttacgatgaaaacggtaaccctgtagacatcgttctgaaccca
ctgggcgtaccttcacgtatgaacatcggtcagattctggaaacccacttgggtatggct
gcgaaaggtattggtgacaaaattaatgctatgcttaaacagcagcaagaagttgccaaa
ctgcgtgagtttatccagaaagcctatgaccttggtgatgacccacgtcaaaaagtggat
ctgaatactttctctgatgaagaagtattgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcaactccagtgtttgatggtgcgaaagaaattgaaattaaagaactgttgaaa
ctgggtggtctgccaacttctggtcagattacattgttcgacggccgtactggtgagaag
tttgagcgtcaagtaactgttggttacatgtacatgctgaaactgaaccacttggttgac
gataaaatgcacgcccgttctactggttcttacagcttggttactcagcaaccgctgggt
ggtaaagctcagttcggtggtcagcgtttcggggagatggaagtgtgggcactggaagca
tacggtgcagcctatacactccaagagatgttgactgttaagtcggatgacgttaacggc
cgtacgaagatgtataaaaacatcgtcgatggcagccatcagatggaacctggtatgccg
gaatccttcaacgtattgttgaaagaaatccgttcactgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
