Paenibacillus thiaminolyticus: NDS46_26510
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Entry
NDS46_26510 CDS
T08812
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NDS46_26510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pthi03021
]
NDS46_26510
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_26510
Enzymes [BR:
pthi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NDS46_26510
Transcription machinery [BR:
pthi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NDS46_26510
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NDS46_26510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WCF07784
LinkDB
All DBs
Position
complement(5838256..5839200)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNEEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIPGVYEDVTEIILNLKALSLKIHSDEEKVLEIDADGEGVVTAGDIRADSDVEI
LNPDLRIATLAQGSRLHMRIFANRGRGYVQADGNKREDQPIGVIPVDSIYTPISRVNYNV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRMED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagatcgaaaagccgaaaattgagaccgtggacgtcaatgaggaaggcacatac
ggcaaatttgtcgtagaaccgctggagcgaggatacggaacgacgctaggtaactccctg
cgccgtattctgctctcctccttgcctggtgctgcggtgacgtccgtccaaatcgacggt
gtcctgcacgagttctcgacgattccaggcgtctatgaagacgtaacggaaatcatcttg
aacttgaaggccctgtcgctcaaaatccactccgatgaagagaaagttctcgaaatcgat
gcggatggcgaaggggttgtaacggctggcgatattcgagcggacagcgatgtggaaatt
ttgaacccggatctccgcattgcaactttagcgcaaggttccagactccatatgcgaatc
ttcgcaaatcgtggtcgtggctatgtgcaggctgacgggaacaaacgggaagaccaaccg
attggtgtgatcccggttgactcgatttatacgccgatctcccgcgtgaactacaacgtg
gagaatacgcgtgtcggccaagtgacgaactacgacaagttaacccttgaagtgtggacg
gatggaagcattcgaccggaagaagcggtgagcctcggtgcgaagattttgacggagcac
ttgatgctgttcgttggattgacggatgaagcgaaagacgcggaaattatggttgaaaaa
gaggaagacaaaaaagagaaagtgcttgagatgacaatcgaagagctcgatctctccgtt
cgttcctacaactgcttgaagcgtgcaggcatcaatacggttcaagagctgattacgaag
accgaagaagatatgatgaaggtccggaacctgggccgcaaatctttggaggaagttcaa
gagaagctcgaagaactcggcttgggccttcgcatggaagactaa
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