KEGG   Phaeodactylum tricornutum: PHATRDRAFT_50309
Entry
PHATRDRAFT_50309  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12825  splicing factor 3A subunit 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATRDRAFT_50309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_50309
Spliceosome [BR:pti03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PHATRDRAFT_50309
 Complex B
    PHATRDRAFT_50309
 Complex C
   U2 SnRNP specific factors
    PHATRDRAFT_50309
SSDB
Motif
Pfam: ubiquitin TECR_N
Other DBs
NCBI-GeneID: 7198972
NCBI-ProteinID: XP_002185159
JGI: 50309
UniProt: B7GDN2
LinkDB
Position
28:258638..259444
AA seq 228 aa
MLSKGTDSKKRLEEANRIIWQQAQNPAGGVGPTLPVSAPQEGTLLHHNVPAMDIGIEPSA
KRPRVDTATVIPPPPPPPPPPPPLVPQSNSIVPPPGFSAATEDPFTISGSAPSQGLTEGN
DLLSESDFVASLSKPEVTLQIRVPNDPTQMAWNFYGQIVSLSINVKSTVKVVKQEVSRVN
LNNMPANKIQLKNTATGAFLKDSLSLAALNLGPSASLELVPKTRGGRK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgttgagtaaagggaccgactccaagaaacgattggaagaggccaaccgtattatatgg
caacaagcgcagaatcctgcaggtggcgttggtccaacgcttcctgtgtctgctccacaa
gaaggcacgttgctacaccataatgtcccagctatggatattggaattgaaccgtcggcg
aaacgaccaagagtcgatacggctacggttattccgccgccaccacctcctcctcctcct
ccaccgccgcttgtacctcaatccaattcaattgtacctccccctgggttttctgctgct
acagaagatccgtttacaatttcaggctccgcaccttctcaagggctcacagaagggaat
gatctattgtccgaatccgacttcgtcgcatcgctgagcaagccagaagttaccttgcag
attcgggtaccaaacgacccgacgcaaatggcttggaatttctacggtcagattgtttca
ttatctattaatgtgaagtctacagttaaagtagtcaagcaagaagtctcacgggtcaac
cttaacaatatgccggcgaacaaaattcagctaaagaataccgctacgggagcttttctc
aaggacagcttgagtctggcagctctcaaccttggtccgagcgcaagtctggaactagta
ccaaaaacgagaggtggtagaaaataa

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