Phaeodactylum tricornutum: PHATR_52094
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Entry
PHATR_52094 CDS
T01075
Symbol
RNAP-II_1
Name
(RefSeq) hypothetical protein
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PHATR_52094 (RNAP-II_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATR_52094 (RNAP-II_1)
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PHATR_52094 (RNAP-II_1)
RNA polymerase I system
RNA polymerase I
PHATR_52094 (RNAP-II_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
7204582
NCBI-ProteinID:
XP_002185825
JGI:
52094
UniProt:
B5Y3D1
LinkDB
All DBs
Position
11:complement(111630..112673)
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AA seq
319 aa
AA seq
DB search
MRILERPSEHELVLEFLHVDTSFVNALRRILLAEVPTVALENIYMWENSSLIHDEVLSHR
LGLIPLKIDARLLDEQDDDDPSPTDRNTVVFRLGVSCGSDPNKGKAKHKADSHENANDAA
EADQDERPYTKHVYSKDLVWVPQGDQEERLQDICAMHDDILIAKLRPGQSIELEVHGRVG
VGKDHAKFSPVATASYRLMPHIELLRDVYDEVADELVHVYEPGVFEIVPTDATDPAGTSR
KARVCNPYACTMSRNYMRHTELAQAVRMSRIPDHFIFSVESVGMYAPGVLVAEALRILQR
KCRKVMDYADEANLKQDHV
NT seq
958 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggaacgtccatccgagcacgaactggtcttggaatttctccacgttgac
acgtctttcgtcaacgcgttgcggcgaatccttttggctgaagtaccgacggtggcgttg
gaaaacatttacatgtgggaaaactctagcctaatacacgacgaagtgttgtcgcaccgg
ctgggactgattcccttgaagattgacgctcgcttattggacgaacaagacgacgacgat
cccagtccgaccgatcgcaacacggtcgtttttcgcttgggagtctcgtgcggctcagat
cccaacaagggcaaagccaagcacaaagccgattctcacgagaatgccaatgacgctgcg
gaagcggatcaggatgagcgaccctacaccaaacatgtttattccaaagacctagtatgg
gtcccgcaaggcgatcaggaagaacgattgcaggacatttgtgccatgcacgacgatatc
ttgattgccaaactccgaccgggacaatcaattgaattggaagtccacggccgggtaggg
gtgggcaaggaccacgcaaaattctctcccgtcgccacagcgtcctaccgtctcatgccg
cacattgaactgttgcgggacgtctacgatgaggtggcagacgaactcgtgcacgtttac
gagcccggcgtctttgaaatcgtaccgaccgacgcaacggatccggcaggaacgtcccgc
aaagctcgtgtgtgcaatccctatgcttgcaccatgagtcgcaactatatgcgacacacc
gaactcgctcaagccgtacggatgagccgcatcccggatcactttattttctccgtcgaa
agtgtcggcatgtacgcacccggggtgctagtggccgaagccttgcgcattctgcaacgc
aagtgtagaaaagtcatggattatgcggacgaagcaaacctgaaacaggatcatgtgt
DBGET
integrated database retrieval system
