Paenibacillus tianjinensis: JRJ22_01155
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Entry
JRJ22_01155 CDS
T07842
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj00040
Pentose and glucuronate interconversions
ptj01100
Metabolic pathways
ptj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JRJ22_01155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JRJ22_01155
Enzymes [BR:
ptj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JRJ22_01155
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QSF45311
UniProt:
A0ABX7LD38
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Position
237407..239599
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AA seq
730 aa
AA seq
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MKKWTAKATGILLLFSMALTLIAGGWGNTVAHAAGLTITGSGGWNETAYVEWSPVSNASG
YNVYVKPANAADSQYQQINNELIRKYASYWRADAVGLVAGSYVMKVEAILTGGGTASAVS
DTLTVAPFDRSGFAFSANSPLGTGSGAYNANGTLKSGAQVLYITSQNAQTVTLPVKVSSS
GAVQNGVGLGGVLTLRQKGYDTTPLAIRIIGKVTASDLSGQLNSSGYLQVKGKSNYSEMN
ITIEGIGDDAYAYGWGLLLRYVGNVEVRNLGLMLFPDDGVSMDTGNANVWVHNNDIFYGS
AGGDADQAKGDGSTDLKNGSSYITISYNHYWDSGKSSLVGLTEPAEFFATFHHNWFDHSD
SRHPRIRVASVHIYNNFYDGISKYGVGVTSGGSAFVESNYFRHTKYPMMISLQGTDALGE
EGTFSGENGGMIKAYNNLVADAASLIYANSNTGTAPANATSFDAYLASARNETVPGSYKA
LTGGTAYNNFDTTVNTGVSASAVDSVSAVEQIVTAKAGRLDSGDFTWTFNDSVDDASYDL
NTALMSAIRSYTTGLVSVGGNSSPTSPTPTPTATVTPTATPVPTATATPTETPVPTATPT
PTATPAPTATATPTPTATPTTGAYVHNFTTSGTTSSFFNIQGNLSTSKGTVVYNGLTLTQ
CLKIESATSIAFTATKASTLTLVFNAEGTQIKVDGTSYPITNRIATVSLAAGAHTITKDS
TANLYYIELK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtggacggcaaaggcaaccggtattctgctgttattttcaatggcactaact
ttaatagcaggcggatgggggaatacggtggcacatgctgcgggccttacgatcaccggc
agcggaggctggaatgaaaccgcatatgtagaatggtcaccggttagtaatgcctcagga
tacaatgtatatgttaaaccggcaaacgcagcggactcgcagtatcagcaaattaataat
gaattgatccgcaaatatgcttcctattggagagctgatgctgtagggctggtagccgga
agttatgtgatgaaggtcgaggcaattctgacagggggagggacggccagtgctgtatcc
gatactttaactgtagcgccgtttgaccgttccggatttgctttttcggcaaactctccg
ttaggcacaggttcaggcgcatataatgcgaatggcaccttgaaaagcggcgctcaggtc
ctgtatatcacctcccagaatgcacaaaccgtaacccttcctgtaaaagtcagcagctca
ggtgctgtacaaaacggcgtgggtttgggcggggttttgactctaagacaaaaaggctac
gacaccactccgctcgccatccggattattggcaaagttacggcctcagatttgagcggg
cagctcaacagcagcgggtatcttcaggtcaaaggtaaaagcaattattcggaaatgaat
attacgattgaagggatcggggacgatgcttacgcctatggctgggggctgcttctgaga
tatgtcggtaatgtggaagtgagaaacctgggcctgatgttattcccggacgatggcgtg
tcgatggacacggggaatgcgaatgtatgggtgcataataatgatattttctacggatct
gcaggcggggatgcggaccaggccaagggtgacggttccacagaccttaagaacggttcg
tcgtacatcacgatctcttacaatcactactgggattcgggaaaatcttcgctggtcggg
ctgaccgagccggcggaattcttcgccaccttccatcataactggttcgatcattcggac
tcccgtcatccgcgtatccgtgtggcttctgttcatatctataataacttctatgatggc
atctcaaaatatggcgttggtgttaccagcggaggttccgcctttgttgaatccaactat
tttagacataccaaatatccgatgatgatttccctgcaaggcacggatgctctgggagaa
gaaggtacattctcaggcgaaaatggcgggatgatcaaagcctacaacaatcttgttgcg
gatgcggccagtctgatttatgccaactccaatactggaacagcaccggctaacgcaacc
tcttttgatgcgtatctggcatcggcgagaaatgaaaccgttccgggctcatacaaggca
ttaacgggcggaaccgcttataacaacttcgatacaacagttaacacgggagtaagtgca
tctgccgttgacagcgtaagcgcagtagagcagattgttacggcaaaagccggccgcctg
gacagcggagacttcacctggacattcaatgattccgtggatgacgcatcctatgacctc
aatacagcactgatgtccgcaatcagaagctacaccaccgggcttgtatcggtaggcggc
aactccagcccaaccagcccgactccaacaccaacggcaacagttacgcctacagcgact
cctgtaccaacagcaacggctacgccaacggaaactccagtgccaaccgcaacacctaca
ccaacggcaactcctgcaccaaccgcaacggcgacaccgacaccgacagcaactccaacc
actggagcttatgtccacaacttcaccacatcagggacaacaagcagcttcttcaatatt
caaggaaatctctccaccagcaaggggacggtcgtatataatggtctgactctaactcag
tgtctgaaaatcgagagcgcaaccagcatcgcgttcactgcaacgaaagcttctaccctg
acattagtgtttaacgccgaaggaacccagataaaagtggacggaacaagctatcccatc
accaaccgtattgccacggtatctcttgcggcgggtgcacataccattacgaaggatagc
actgcgaatctgtattacattgagttgaaatag
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