KEGG   Purpureocillium takamizusanense: JDV02_008547
Entry
JDV02_008547      CDS       T08929                                 
Symbol
CDC39
Name
(RefSeq) CCR4-NOT core subunit cdc39
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
ptkz  Purpureocillium takamizusanense
Pathway
ptkz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptkz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JDV02_008547 (CDC39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptkz03019]
    JDV02_008547 (CDC39)
Messenger RNA biogenesis [BR:ptkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     JDV02_008547 (CDC39)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     JDV02_008547 (CDC39)
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind DUF3819 CNOT1_HEAT CNOT1_TTP_bind ARM_Cnot1
Other DBs
NCBI-GeneID: 72070493
NCBI-ProteinID: XP_047846163
UniProt: A0A9Q8VFC9
LinkDB
Position
8:complement(join(1673776..1673814,1673873..1679805,1679866..1680190,1680261..1680512))
AA seq 2182 aa
MVPPPRVGSFSPNPSQTLQTGTSHSPHPSHGGVLSAGASPSTSSPTGANPLTKIVVAQVY
LLLSTIKEDKDRARWELQVDQLQKLIDEHGMEVFSKYFTRLVAGNAPQIFPGLNRPVANP
GNYHILVAEMRKIAHDADQASKIAESVESGTEDIFRDFDLSTFMEHFKLDALEKTLLALA
FKTGSRSDLKTKADAILSTNFSAFMDIVSRPEIEAHADLTPAFIALIVDRFLQYHPPSFN
AASRRDLQNFIAKRYVAMDQAPPSEVLAALDLGRVLADRPANALARYVQRTGAEFTRDEE
TCLSYLQGRPGNMQLGPDQVSAALTFTAITQSPQQELVVLVAALQRVLPKTFDWTEVVLF
FDQATARISSTQFLRLYLALLPIAQDPKYDFDIQRLWGGSWSEPEAQLSFVSAFASLTPD
QLDATTIPGLQRSISLDDYANSPANVQERAAVAVKHPLVSVAALSAIFNVALNSVHASQS
VEAKRLFQEVVVPNLDIFLVSAFEVPRQSWATMAVDTLNSLFENFLYKRSPEYDFVLDSL
WKKDRTWVTQRLVDAHAVKPIDLPLIFDHALKHGWLDHLVYLPSGFGVDLAAYAHAEGHL
DLSTWARFNAERSVEMSRVLLQFLMIKANLEIQFQRPSDAQSPAKTSTSLQVRTVSALLQ
ILEDFLPKAPVQDLILVQRHCITAYPRLINYGEGYDDVIDINGRDGNALSQAANSKMEEH
YKRMYGDEIQVRTIVEILDRYKHSRDPLDQDAFACMIHGLFDEYNHYVDYPLEALATTAV
LFGGIISHKLISDLPLKIGLGMILEAVRDHLPDDPMYKFGLQALMQLLVRFREWPGFCKQ
LLQIPGLQGTEAYKKAEEIVRDHEEDIVRSRNGAGTPHGLNFPGDSFTNGTPDDAANERQ
APPFASIGIDPIPPGVEFEEPGDEEQGKIQFVLNNITEGTLQSMRNELRDMVEHKHQQWF
ASHLVEERAKMQPNYHHVYLELVKLFEDKTLWNEVLRETYISVARMLNSEATMQNSTERT
HLKNLGGWLGLLTLARDRPIKHKNIAFKQLLIEAHDTKRLIVIIPFVCKVLIQGASSAVF
RPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRPAVEDA
PEVLPHEQLDAFDTLSLNGIGSVVGAGLSPQVVAPTIPDVGPLINIPPANEMVVSTTRLH
EIVRSALTRALQDIIQPVVDRSITIAAISTVQMVRKDFVSEPDENKMRNAAVSMVKATAG
SLALVTSKEPLRANMTNYMRNLANDLPSGLPEGTIIMCVNSNLDLACNIIEKQAEERAVP
EIEDMLEEDVQARRRHRAQQPNEPFYAGTVNRWAMTIPSPYKLSPNINGLNSDQMQIYDD
FARQPRNTTVSASHAPSASDATRSLANEVLQETYNTVPSMPTPAETPSVQHLGSQLPYAP
VSSAAGNLGRGAGANAYHIDVRGLAERVNKLLQELLRVAAEAQEEHFIGLPRPHPVLDVV
DALVQLIIKTSQSSEEFAIYTAEQISALIFQQVEDNLTLESLVHVLETLRKISGPALNSR
VRALFSQQPGANFLSVPLLAALIRTDLIDWRNIDAAMSKALESRKDSSLEFLEHLLDIAL
LNNRPIALYTDFVRTLERAWTWVCDEPGNGTAQRLKERLLNSGLPQPSWSSTGDDKSAFR
QEQLEYVFEEWVHLCNNPNATAETSRVFMDQLELRQLVRDQGDLLVMVRIALELCVDRFD
HIAHSSAISDAYVMVDALAKLICVFTTTHNDTFSSRVSVMDSVLVLIGLVLRNHHIKRGE
HLNQRVFFRLYSLLLHEVHSASDDYTEEDQRRLLLSFASKLENIGPLYLPGFTFGWLSLV
QHRAFAPVLLQMPGNAGWRPYAKLIVQLLDTLSEQLKSLNVSNMAKELYHATLKLLVILQ
HDFPDFVAANHVTFCASVPPHCSQLLNAILSANPQQNPTTGMKPDRSEEISLNPGLIEDA
TAVLRDCGLLAVLDQVLLNGPAEDTVAQIAHTMTHNSPQETSFGHIPVAVNAHIIGAVVV
YIGQHAADRMSRSPNAAAVTGNESDVATLSLLVHELPPEARYYLVSCIMNQLRFPSAYTD
FFCHVVLHIFGKDLNDPEESEIRQEITRVLLERLVGFWPQPWGLMYTVLELVKNEKYMFF
DLPFVKSTPEVAERFATILQRN
NT seq 6549 nt   +upstreamnt  +downstreamnt
atggtccctccaccaagagtgggatcattctcaccaaacccttcgcagactctccagacg
ggaaccagccactcgccgcatccgtcgcacggtggtgtcctgagtgctggcgcgagcccc
agtacaagcagtccgactggggctaaccccttgacaaagattgttgtcgcccaagtctac
ctcctacttagcactatcaaggaggacaaggatcgcgccaggtgggagttacaggtcgat
cagctgcaaaagctcatcgatgaacacggcatggaagtgttctccaagtactttactcgg
ttggtagcgggaaatgcgccccaaatcttccctgggcttaaccgccccgtcgccaaccct
ggtaattaccacattctcgtcgccgagatgcgaaagattgcgcacgatgccgatcaagca
agcaaaatcgccgagtcggtagaaagtggcaccgaagacatcttccgcgactttgacctg
tcaaccttcatggaacacttcaagctcgacgcgctggagaagacactcttggcgctggcg
ttcaagactggctcccgctcggacttgaagactaaggctgacgccattttgtcgaccaat
ttttcggctttcatggacatcgtctcgcgcccagaaatcgaagcccacgctgaccttact
cctgcgttcatcgcgctaattgtcgatcgattccttcaatatcatcctccaagcttcaac
gccgcttcccggcgagatctgcagaatttcattgccaagcgatacgtcgcgatggatcag
gcacccccttcagaggttcttgcggctctcgacctcggtcgagtccttgctgacaggccg
gccaatgccttggcgcgatatgtgcagaggacgggggctgagttcacgagagacgaggag
acgtgtctgtcgtacttgcagggtcgtcccggcaacatgcagcttggacctgaccaggtc
tctgctgcgctcacgttcactgcaatcactcaaagtcctcagcaagaactcgtcgtactt
gttgcagccctgcaacgcgtcctcccaaaaaccttcgactggacggaagtcgttctgttc
tttgatcaagccacggctcgaatctcgtctacgcaatttctgcgactttatctggcacta
cttcccattgcgcaggacccaaagtacgatttcgatatccagagactttggggtggttct
tggagcgagccggaggcccagctgtccttcgtcagcgctttcgcctccctgacaccagat
cagttggacgccactaccatcccaggtctacaacggagcatcagcctcgacgactacgca
aactcccccgcaaacgttcaggagcgtgctgccgttgcggtaaagcaccctctcgtttcc
gtagccgcattgtccgccatattcaacgttgcccttaactcggtgcatgcgtctcagagc
gtcgaagcgaagcgcctttttcaggaggtagtggttcctaacctggacatttttctagtg
tctgctttcgaggtccctcggcagtcctgggcgacaatggcagtggatacgctgaactca
ctgttcgagaattttctgtacaagcggtcacccgagtacgattttgtgctcgacagtctg
tggaagaaggacaggacatgggtaacccagcgattggttgatgctcatgccgtcaagccc
atcgacttacccttgatctttgaccacgcgctgaaacatggatggctggatcacctcgtc
tacctgcccagcggcttcggagtcgatctagctgcatacgcgcatgccgaaggccacctc
gacttgagcacctgggcacgcttcaacgcggagagaagcgttgagatgtctcgcgtcctg
ctgcaatttcttatgatcaaagccaacctggaaatacagttccaacgtccctcagatgca
caatccccggccaagactagcacgagcttgcaggtcaggactgtatctgcgttgctgcaa
atcctggaggacttcctgcctaaggcgccggtgcaggaccttattctggtgcagcgccac
tgcatcacagcatacccacgattgatcaactatggtgagggctacgacgatgtcatcgat
atcaacggcagagatggaaacgcattatcacaggctgccaacagcaagatggaagagcac
tacaagagaatgtacggtgatgaaatccaggtacgcacaattgtggagattctggatcgc
tacaagcactcgagggatcccctggaccaagacgcgttcgcctgcatgatacacggccta
ttcgacgagtacaatcactatgtcgactatcctctggaggctctggctacgaccgctgta
ctctttggggggatcatctctcacaagcttatatcagacctccctctgaagatcgggctg
gggatgattctcgaggctgttcgcgaccatctgcccgacgaccccatgtacaagttcggt
ctccaagctctgatgcagcttctcgttcgctttcgggaatggcctgggttttgcaaacag
ttgttgcaaatcccaggcctgcaaggcacagaagcgtacaagaaagccgaagagatcgtg
cgcgatcatgaggaggacattgtacgatctcgcaacggtgccggtacaccacatggtctg
aacttcccgggggactcttttaccaacggaactcccgacgatgcagcaaacgaacgccaa
gcgcccccattcgcatctatcggcattgatccaattcctcctggcgttgagtttgaggaa
cccggtgatgaggagcagggcaaaatccagtttgttttgaacaacatcacagagggaact
ctgcagtcaatgcgcaatgagctgcgcgatatggtggagcacaagcaccaacagtggttt
gcaagccatcttgtcgaagagcgtgcgaaaatgcagcccaactatcaccacgtttatttg
gaacttgtcaagctcttcgaagacaagacgctctggaacgaagtgcttcgggaaacatac
atcagcgtggctcgtatgcttaactcggaggctacgatgcagaactcgactgagcggact
catctgaagaaccttggtggttggctcggtctcctgacccttgctcgtgaccgtcccatc
aaacacaagaacatcgcgttcaagcaactgctaatcgaggctcatgacaccaagaggctc
attgtcatcatccctttcgtttgcaaagtcctcattcaaggagcttcttcagctgtgttt
cggcctccgaatccatggctcatggacatcatccacttgctcattgagctctaccaccac
gccgagctgaagctgaacctgaagtttgagatcgaggttctgtgcaaggggttgaatctg
gatcacaagagcattgaaccatcgggcgaaatactgaaccggcctgcggtcgaggacgca
cccgaggtgctcccacacgagcagcttgacgcatttgataccttgtctcttaatggcatt
ggatcagtcgttggcgcgggcctctccccgcaagtcgtcgcaccaaccatacctgacgtg
ggaccattgatcaacattcccccagccaatgagatggttgtgagcacgacacgccttcac
gagattgtccggagtgctctcacaagggcgctgcaggatattattcagccggttgtggac
cggtcgatcacgatagcggcaatttcgacggtccagatggttcgcaaagacttcgtttcg
gaaccagatgagaataagatgaggaacgctgccgtcagtatggtcaaggcgaccgcgggc
agcctggcccttgttacttccaaggagcctctccgggcgaacatgaccaactacatgcgc
aatcttgccaacgaccttccctcgggtctgcccgagggaacgattatcatgtgtgtcaac
tcaaacctcgaccttgcctgtaacatcatcgagaagcaggccgaagagagggctgttccg
gagattgaggatatgctcgaggaggacgttcaggctcgaagacgacaccgcgcgcagcag
ccgaacgagccattctatgctggcacggtcaatcgctgggccatgaccatcccaagccca
tacaaattgtcgcccaacattaatggccttaacagcgaccaaatgcaaatttacgacgat
tttgcaagacaaccgcgaaataccacggtatcggcatcgcatgcaccatctgcttcggac
gccactcgatctctggccaacgaggtcctgcaagaaacctacaacacggttccgagtatg
cccacaccggccgagacgccctcggtacaacatctcggctctcagctgccatatgctccg
gtttctagtgctgcgggcaacctgggtcgcggggccggagcgaatgcctatcacattgat
gttcgtggtctggctgagcgcgtcaataagctactacaagagctcttgcgggttgctgcg
gaggctcaggaggagcacttcattggtctcccgaggcctcatccagttctggacgtggtc
gatgcgttggtgcagctcataatcaagacgtcccagagctcggaagagttcgccatctac
accgcagagcagataagcgctctcatcttccagcaagtcgaggacaacctgactttggag
agcctggtccatgttttggagacgttgcggaagatttcgggacctgcattgaacagtcga
gtgcgtgcgcttttcagccagcaacccggtgcgaatttcttgagtgtgcccttgcttgct
gccttgattcgcaccgacttaatcgactggaggaatatcgacgcggcaatgtctaaggct
ctcgaaagcaggaaagattcgtccctggagtttctggaacacttgctcgatatcgccctc
ctcaacaatcggccaatcgccctttatacagatttcgtgcgcacactggaaagggcgtgg
acttgggtttgtgacgagcccggcaatggtactgcccagagactaaaggagaggcttctg
aactcggggcttccgcaaccctcgtggagtagcactggagacgataagtcagcctttcga
caggagcaactggagtatgttttcgaggagtgggtccatctctgcaacaacccgaacgca
acagccgagacttccagggtctttatggatcaactggagttgaggcagcttgtcagagat
cagggcgaccttttggtcatggtccgcattgctcttgaactgtgtgtcgatcgtttcgac
cacattgcgcactccagtgccatcagcgatgcatatgtcatggtcgatgccttggctaaa
ctgatttgtgtcttcactacaacccacaacgatacattcagctctcgcgtttccgtcatg
gactctgtcttggttctgatcggactagttctccgcaaccaccatatcaagcgaggagag
cacctgaaccaacgcgtcttcttccgcctttactcgctgcttcttcacgaagtccacagc
gccagcgatgattacaccgaagaggatcagcgacgattactgctctcctttgcctccaag
ctcgagaatatcgggcccctctatctcccgggttttacctttggttggctttcgcttgtt
cagcaccgagcttttgccccagtcctgttgcagatgcccggaaacgctggctggcgcccg
tatgcgaaactgatcgtgcagttgttagacacgctaagcgaacaactcaaatcgctcaac
gtgtcaaacatggccaaggagctttatcacgccactctcaagctcttggtgattctccag
catgatttccctgactttgtcgcggccaaccacgtcaccttctgcgccagcgttccgccg
cattgcagccagctgcttaatgcaattttgtcggccaatccgcagcaaaatccgactaca
ggcatgaagccagatcgttcggaagaaatcagcttgaatcctggactgattgaagacgcc
acggctgtgctgcgagattgtgggcttcttgccgtgttggaccaggtcctcctcaacgga
cccgccgaggacactgtcgcacagattgcgcacacgatgacgcacaacagcccgcaggag
acctcctttggacatatcccggtggcagtcaacgcacatatcatcggggctgtggttgtg
tacatcgggcaacacgccgcagaccgcatgtctcgctcaccaaacgccgcggccgtaact
gggaacgaatctgatgtagcgactctgtctctgcttgttcacgagctgccgcctgaagcc
aggtactacctcgtatcctgcattatgaatcagttgcggttcccgagcgcctacacagac
tttttctgtcatgttgttctccacatctttggcaaggacttaaacgaccctgaggagtcc
gaaattcgccaagagatcactcgggtgctcctcgagcgtctggtcgggttctggcctcaa
ccctggggactcatgtatacggttttggagctggttaagaacgaaaagtacatgttcttt
gatctgcccttcgtcaagtcgacaccagaggttgcggaaaggttcgcgacgatactccaa
cgtaattag

DBGET integrated database retrieval system