Pseudoalteromonas translucida KMM 520: PTRA_a0122
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Entry
PTRA_a0122 CDS
T04220
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn00130
Ubiquinone and other terpenoid-quinone biosynthesis
ptn01100
Metabolic pathways
ptn01110
Biosynthesis of secondary metabolites
ptn01240
Biosynthesis of cofactors
Module
ptn_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PTRA_a0122 (ubiD)
Enzymes [BR:
ptn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PTRA_a0122 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ALS31508
UniProt:
A0A0U2MLV5
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All DBs
Position
I:complement(108002..109468)
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AA seq
488 aa
AA seq
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MKYKDLRDFIDLLEKRGELKRITQEIDPYLEMTEIADRTLRAKGPALLFENPKGYDIPVL
ANLFGTPKRVAMGMGQEDVSELREVGKLLAFLKEPEPPKGIKEALGQIPVYKQVLNMPAK
EVKKAPCQEVILQGDEVDLTKLPIQHCWPGDAAPLITWGLTVTKGPYKKRQNLGIYRQQL
LGKNKIIMRWLSHRGGALDFQEWCKENPGQPYPVSVALGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSISNDLQVPASAEIVLEGYIMPGEMAPEGPYGDHTGYYNEVDDFPV
MTVTHMTHRKNPIYHSTFTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYLPPEGCSY
RMAIVTMKKQYPGHAKRVMMGVWSYLRQFMYTKFVIVCDDDINARDWEDVIWAITTRMDP
ARDTTLIENTPIDYLDFASPISGLGSKMGMDATNKWPGETNREWGEPIEMDKATKDRVDD
IWQSLNIL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaagatcttcgtgattttatcgatttacttgaaaaaagaggtgagcttaaa
cgcatcactcaagaaatcgacccgtatcttgaaatgaccgaaatagccgaccgtacatta
cgtgccaaaggccctgcgttattatttgaaaaccctaaaggttacgatattccggtattg
gctaacttatttggcacacccaagcgtgttgccatgggcatgggccaagaagatgtaagc
gaattacgtgaagttggcaagctcttggcttttttaaaagaaccagagccaccaaaaggc
attaaagaagcgttagggcaaatacctgtttataaacaagtgcttaatatgccagctaaa
gaagtaaaaaaagccccctgccaagaagttattttacaaggtgatgaggtcgatttaact
aaactgcctattcaacattgctggccaggcgatgccgcaccgttaattacttggggcctt
accgttactaaagggccttataaaaagcgccaaaatttaggcatataccgccagcaactg
ttaggcaaaaataaaattattatgcgctggttatcacaccgtggcggtgcgcttgatttt
caagaatggtgtaaagaaaacccaggccaaccgtacccggtatctgtggcattgggcgcc
gatccggcaactatattaggtgcagtaacccccgtacccgacacattaagcgaatacgct
tttgcaggcttactgcgcggtagtaaaactgaagtagttaaatcaatatcaaacgattta
caagtacccgcaagcgccgaaatagtacttgaaggctacataatgccaggtgaaatggca
cctgaaggtccgtatggcgatcacaccggatattataacgaagttgacgactttccggtg
atgacagtaacccatatgacccaccgtaaaaaccctatttaccacagtacctttactggc
cgcccgcctgatgagcctgctattttaggggtggcattaaacgaagtatttgtacctatt
ttacaaaaacaattccctgaaattgttgatttttacttaccgccagaaggctgctcgtac
cgcatggctattgttaccatgaaaaaacaatatcccggccatgcaaaacgcgtaatgatg
ggagtgtggtcttacttacgtcaatttatgtataccaagtttgttattgtgtgcgatgac
gatattaacgcccgagattgggaagatgttatttgggcaattactacgcgtatggacccc
gctcgcgataccactttaatagaaaatacaccaattgattatttagattttgcgtcacca
atttctggccttggctctaaaatgggtatggatgcaacgaataaatggcctggcgaaaca
aaccgtgaatggggcgagccgattgagatggataaagccaccaaagatcgcgtagacgac
atttggcagagccttaacattctctaa
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