Planktomarina temperata: RCA23_c10610
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Entry
RCA23_c10610 CDS
T03229
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00970
Aminoacyl-tRNA biosynthesis
ptp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCA23_c10610 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ptp03029
]
RCA23_c10610 (gatB)
Enzymes [BR:
ptp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RCA23_c10610 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RCA23_c10610 (gatB)
Mitochondrial biogenesis [BR:
ptp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RCA23_c10610 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF2290
Motif
Other DBs
NCBI-ProteinID:
AII86612
UniProt:
A0AAN0RIA7
LinkDB
All DBs
Position
complement(1133825..1135336)
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AA seq
503 aa
AA seq
DB search
MLDQTFETPKPKVIAGAKHDWELVIGLEVHAQVTSKAKLFSGASTQFGAEPNSNVAFVDA
GMPGMLPVINEECVAQAVRTGLGLKAQINTFSAFDRKNYFYPDLPQGYQISQLYHPIVGE
GEVFVELGDGTARLVRIERIHLEQDAGKSVHDMDPNNSFVDLNRTGVALMEIVSRPDIRG
PEEAAAYVTKLRQIMQYLGTCDGNMQNGSLRADVNVSVCRPGDYEKYQATQDFSHLGTRC
EIKNMNSMRFMQAAIDFEARRQIAILEDGGEVTQETRLYDADKNETRSMRSKEEAHDYRY
FPCPDLLPLEIEQEWINDLAAQLPELPDAKKSRFINEFGLSNYDANVLTAETQNASYFEK
VAQGRDGKVAANWVINELFGRMKKDDVTIANCPVTPDQLGGVIDLIASGEISGKIAKDLF
EIVYTEGGNPAEIVESRGMKQVTDTGAIEAAVDQIIADNPAQVEKAKQNPKLAGWFVGQV
IKATDGKANPQVVNQIVAAKLAL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccaaactttcgagacacccaaacccaaggtgattgccggggcaaaacatgat
tgggaactggtgatcggccttgaggtccatgcgcaggtgacctcaaaagccaagctcttt
tccggagcctccacccaatttggcgccgaacccaactcaaatgtcgcctttgtggacgcc
ggaatgcccggcatgttgcccgttattaatgaggaatgcgtggcccaagcggtgcgcacc
gggcttgggctcaaagcacagatcaacacattctcagcctttgatcggaaaaactacttc
taccccgacttgccacagggctatcaaatcagccagctgtatcatccgattgtcggagag
ggcgaagtcttcgtcgaattgggagatggaacagcgcgtttggtgcgcattgaacgcatt
cacctggagcaagatgccggcaaatcggtgcatgatatggatcccaacaactcctttgtg
gatctcaaccgcaccggcgttgcgctgatggaaatcgtcagccgccccgacattcgcggc
cccgaagaggcggcggcctatgtcaccaagctgcgccaaatcatgcaatatctcggcacc
tgcgatggcaatatgcaaaacggcagcctgcgggccgatgtcaatgtctcggtctgccgg
cctggggattatgaaaaataccaagcgacgcaagatttctcccaccttggcacacgctgc
gagattaagaacatgaactcgatgcgcttcatgcaggcggcgattgactttgaggcccgc
cggcaaattgccatattggaagacggcggtgaggtaacgcaagaaacccggctttatgat
gcggataaaaacgaaacccgctccatgcggtcgaaagaagaagcgcatgattatcgctat
tttccctgccctgaccttctgcctttggagattgagcaagagtggatcaatgatctggca
gcacagcttcctgagctgccagatgctaaaaaatctcgttttatcaatgaatttggcctg
tccaattatgacgccaatgtcttgacggctgaaacacagaacgccagttattttgaaaaa
gtggcgcaaggccgtgatgggaaagttgcggccaattgggtcatcaatgaactgttcggc
cggatgaagaaagatgatgtcaccatcgccaattgcccggtcactcccgatcagctcggc
ggcgttattgacttgatagcaagcggtgagatttctggcaaaatagccaaggacttgttt
gaaatcgtctatacagaaggcggcaatccggcggaaatcgtcgaaagccgcggcatgaaa
caggtcacagacaccggcgcgattgaagctgcggtagatcaaatcattgccgacaatccc
gcccaagtggaaaaagccaagcaaaatccaaaattggcgggctggtttgtcgggcaagtg
atcaaggccacggacggcaaggccaatccgcaggtggtcaatcagattgtggcggccaaa
ctggcgctgtaa
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