Planktomarina temperata: RCA23_c16300
Help
Entry
RCA23_c16300 CDS
T03229
Name
(GenBank) putative cysteine desulfurase
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00730
Thiamine metabolism
ptp01100
Metabolic pathways
ptp01240
Biosynthesis of cofactors
ptp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RCA23_c16300
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RCA23_c16300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptp03016
]
RCA23_c16300
03029 Mitochondrial biogenesis [BR:
ptp03029
]
RCA23_c16300
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ptp02048
]
RCA23_c16300
Enzymes [BR:
ptp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RCA23_c16300
Transfer RNA biogenesis [BR:
ptp03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
RCA23_c16300
Prokaryotic type
RCA23_c16300
Mitochondrial biogenesis [BR:
ptp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
RCA23_c16300
Prokaryotic defense system [BR:
ptp02048
]
DNA phosphothiolation system
Sulfur modification proteins
RCA23_c16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AII87166
LinkDB
All DBs
Position
complement(1755327..1756376)
Genome browser
AA seq
349 aa
AA seq
DB search
MMQRVYLDHNATSPLRPEARAAMIAAMDALGNPSSVHSEGRAAKAIVEKARGQISEAFGV
GAHDIVFTGSATEAAALALKDRGFHAGDIEHDAVAAWVQADLPLKTGQVCVAQPTGTALQ
LANSETGIVQTLPEGLGFCDMTQGFGKLPLAFSWSGADMACASAHKLGGPKGVGCLLLKP
GVEVAAQVLGGGQEMGRRAGTENIIGIAGFGAAAEASARDLSAGKWATIEKLRNILEKTL
EASGKPLILVGTDSPRLPNTACFAAPGWKGETQVMQMDLAGFAVSAGSACSSGKVKASRV
LRAMGYDEDVASSAIRVSLGLETTEDEVQQFAKVWLAAYERLLARKAAR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgatgcagcgggtctatcttgatcacaacgccacaagcccactgcgtcctgaggcacgg
gcggcgatgattgctgcgatggatgccctgggcaacccctcgtctgtccattccgagggg
cgcgcggccaaagccattgtggaaaaagcccgtggacaaatttctgaggcctttggcgtc
ggcgcccatgacattgtgtttaccggcagcgcgactgaggctgccgctttggccctgaag
gatcgcggctttcatgcgggcgacatagaacatgatgccgtcgccgcttgggtgcaggcc
gatttgccgctaaagaccggtcaggtctgtgttgcgcaacccacagggaccgcgctccaa
ctggccaattcggaaacaggcattgtgcaaaccctgccagagggattggggttttgcgat
atgacccagggctttggcaagctccccttagcattttcttggagtggggctgacatggcc
tgtgcctcggcccataagctgggcgggccaaaaggtgttgggtgcttattgttaaaaccc
ggggtggaggtggccgcgcaggtcctgggcggtggtcaggaaatgggccggcgcgctggc
acggaaaatatcatcggtattgccggttttggcgccgcagcagaggccagtgcccgcgat
ttaagtgccggaaaatgggcgacaatcgagaaacttagaaatattctagaaaagacactg
gaagccagcggaaaaccccttattttagtagggactgactcgccacgcctgcccaacacc
gcctgctttgcagcccccggatggaaaggcgagacgcaggtcatgcaaatggaccttgcg
ggatttgcagtatcggccggctcggcttgctcgtcaggcaaggtcaaggccagccgcgtt
ctgcgggcgatgggatatgatgaagacgtagccagttcagcgatccgcgtatcgcttgga
cttgagaccacagaagatgaagttcagcagttcgccaaggtttggctggctgcatatgag
cggcttttggcacgcaaggcggccagatag
DBGET
integrated database retrieval system