Planktomarina temperata: RCA23_c28990
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Entry
RCA23_c28990 CDS
T03229
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ptp
Planktomarina temperata
Pathway
ptp02024
Quorum sensing
ptp03060
Protein export
ptp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RCA23_c28990 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RCA23_c28990 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCA23_c28990 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptp02044
]
RCA23_c28990 (ffh)
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RCA23_c28990 (ffh)
Secretion system [BR:
ptp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RCA23_c28990 (ffh)
Eukaryotic Sec-SRP protein
RCA23_c28990 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_31
AAA_33
AAA_18
AAA_16
YqeC
AAA_22
AAA_5
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AII88399
LinkDB
All DBs
Position
3073207..3074703
Genome browser
AA seq
498 aa
AA seq
DB search
MFENLSERLGGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVAREFIKKVQSKAT
GSAVTKSITPGQQVVKIVHDALIDTLRGEGEPGDLKIDNPPAAILMVGLQGSGKTTTTGK
LAKRLAGREGKKVLMASLDIYRPAAMEQLAILGAQVGVDTLPIVAGETAVQIAKRAKQQA
TLGGYDVYMLDTAGRLQIDETLMQEVEDVRDAVEPRETLLVVDGLTGQVAVEVAEEFDGK
IGISGVVLTRMDGDGRGGAALSMRAVTGKPIKFVGSGEKMDALETFEPERIAGRILGMGD
IVALVEKAQETLEAEQAERMMRRLQKGMFNMNDLRSQLEQMQKMGGMQGLMGMMPGMAKM
KGKIDQAGLDDSLLKRQIALINSMTKKERANPALLQASRKKRIAAGAGLEVSDLNKLLKQ
HRQMSDMMKKIGKKGGLGALKGMLGGQGAPSQAELAAAQEQIASGAMGGLPKGMSLPKGM
GGLGGGLPGGLSGLGKKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctatccgaacgccttggtggtgtatttgatcggctgaccaagcaaggt
gcgctgtcggaagaggatgtgaaaacagccctgcgtgaggtgcgcgttgcgctcctagag
gccgatgtcagcctgcctgttgcccgcgaattcattaagaaagttcaaagcaaagccact
ggatcggctgtcacaaaatcaatcacccccggccagcaagtggtcaagatcgtccatgac
gctctgattgacacgctgcgcggtgaaggcgaaccgggtgatctgaagatcgacaaccca
cccgctgcgattttgatggtgggtctgcaaggctccggtaaaaccacgaccaccgggaaa
ctggcaaaacgcttggccggccgcgaaggtaaaaaggtactgatggcctcattggacatc
taccgccccgccgcgatggaacaactcgcgattttgggtgcgcaggtgggtgttgatacc
ctgcccatcgtcgccggtgaaaccgcagtccaaattgccaaacgtgccaaacagcaggcc
acattgggcggctacgacgtctatatgctcgacactgccgggcgtctgcaaatcgacgaa
accctgatgcaggaagttgaggatgtgcgcgatgcggtcgagccgcgtgaaacactcctc
gtcgtcgatgggttaacaggccaagtggccgtagaagtcgccgaagaatttgacggcaaa
atcggcatctctggcgtggttctcacccgtatggatggggacggtcgcggtggtgcggcg
ctgtcaatgcgtgcggtcaccggcaagccgatcaaatttgtaggctccggcgaaaaaatg
gatgcgttggaaactttcgagcccgagcgcatcgcgggacgcattttgggcatgggcgat
atcgtcgctttggtcgaaaaggcacaagaaacgcttgaggctgaacaagccgaacggatg
atgcgccgcctgcaaaagggcatgttcaacatgaacgatctgcgcagccagcttgagcaa
atgcaaaaaatgggtggtatgcagggcctgatgggcatgatgcccggcatggcaaaaatg
aagggcaagattgatcaagccggcctcgatgacagcctgttaaagcgccaaattgccttg
atcaattccatgacaaaaaaagagcgagccaatcccgctttgctgcaagccagccgaaaa
aagcggatcgcagcgggggcggggcttgaggtgagtgatctcaataaattgctcaaacag
catcgccaaatgtcagatatgatgaagaaaattggcaaaaaaggcgggttgggcgctctc
aagggcatgctcggcggccagggcgccccaagtcaagcagagcttgccgcagcacaagag
caaatcgccagtggcgctatgggcggcctgcccaaaggcatgagcttgcccaaaggaatg
ggcggattgggcggcggtttgcccggtggcctgagcggtttgggaaaaaagaaatga
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