KEGG   Planktomarina temperata: RCA23_c28990
Entry
RCA23_c28990      CDS       T03229                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ptp  Planktomarina temperata
Pathway
ptp02024  Quorum sensing
ptp03060  Protein export
ptp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RCA23_c28990 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RCA23_c28990 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RCA23_c28990 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptp02044]
    RCA23_c28990 (ffh)
Enzymes [BR:ptp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RCA23_c28990 (ffh)
Secretion system [BR:ptp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RCA23_c28990 (ffh)
  Eukaryotic Sec-SRP protein
   RCA23_c28990 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_31 AAA_33 AAA_18 AAA_16 YqeC AAA_22 AAA_5 AAA_17
Other DBs
NCBI-ProteinID: AII88399
LinkDB
Position
3073207..3074703
AA seq 498 aa
MFENLSERLGGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVAREFIKKVQSKAT
GSAVTKSITPGQQVVKIVHDALIDTLRGEGEPGDLKIDNPPAAILMVGLQGSGKTTTTGK
LAKRLAGREGKKVLMASLDIYRPAAMEQLAILGAQVGVDTLPIVAGETAVQIAKRAKQQA
TLGGYDVYMLDTAGRLQIDETLMQEVEDVRDAVEPRETLLVVDGLTGQVAVEVAEEFDGK
IGISGVVLTRMDGDGRGGAALSMRAVTGKPIKFVGSGEKMDALETFEPERIAGRILGMGD
IVALVEKAQETLEAEQAERMMRRLQKGMFNMNDLRSQLEQMQKMGGMQGLMGMMPGMAKM
KGKIDQAGLDDSLLKRQIALINSMTKKERANPALLQASRKKRIAAGAGLEVSDLNKLLKQ
HRQMSDMMKKIGKKGGLGALKGMLGGQGAPSQAELAAAQEQIASGAMGGLPKGMSLPKGM
GGLGGGLPGGLSGLGKKK
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgtttgaaaatctatccgaacgccttggtggtgtatttgatcggctgaccaagcaaggt
gcgctgtcggaagaggatgtgaaaacagccctgcgtgaggtgcgcgttgcgctcctagag
gccgatgtcagcctgcctgttgcccgcgaattcattaagaaagttcaaagcaaagccact
ggatcggctgtcacaaaatcaatcacccccggccagcaagtggtcaagatcgtccatgac
gctctgattgacacgctgcgcggtgaaggcgaaccgggtgatctgaagatcgacaaccca
cccgctgcgattttgatggtgggtctgcaaggctccggtaaaaccacgaccaccgggaaa
ctggcaaaacgcttggccggccgcgaaggtaaaaaggtactgatggcctcattggacatc
taccgccccgccgcgatggaacaactcgcgattttgggtgcgcaggtgggtgttgatacc
ctgcccatcgtcgccggtgaaaccgcagtccaaattgccaaacgtgccaaacagcaggcc
acattgggcggctacgacgtctatatgctcgacactgccgggcgtctgcaaatcgacgaa
accctgatgcaggaagttgaggatgtgcgcgatgcggtcgagccgcgtgaaacactcctc
gtcgtcgatgggttaacaggccaagtggccgtagaagtcgccgaagaatttgacggcaaa
atcggcatctctggcgtggttctcacccgtatggatggggacggtcgcggtggtgcggcg
ctgtcaatgcgtgcggtcaccggcaagccgatcaaatttgtaggctccggcgaaaaaatg
gatgcgttggaaactttcgagcccgagcgcatcgcgggacgcattttgggcatgggcgat
atcgtcgctttggtcgaaaaggcacaagaaacgcttgaggctgaacaagccgaacggatg
atgcgccgcctgcaaaagggcatgttcaacatgaacgatctgcgcagccagcttgagcaa
atgcaaaaaatgggtggtatgcagggcctgatgggcatgatgcccggcatggcaaaaatg
aagggcaagattgatcaagccggcctcgatgacagcctgttaaagcgccaaattgccttg
atcaattccatgacaaaaaaagagcgagccaatcccgctttgctgcaagccagccgaaaa
aagcggatcgcagcgggggcggggcttgaggtgagtgatctcaataaattgctcaaacag
catcgccaaatgtcagatatgatgaagaaaattggcaaaaaaggcgggttgggcgctctc
aagggcatgctcggcggccagggcgccccaagtcaagcagagcttgccgcagcacaagag
caaatcgccagtggcgctatgggcggcctgcccaaaggcatgagcttgcccaaaggaatg
ggcggattgggcggcggtttgcccggtggcctgagcggtttgggaaaaaagaaatga

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