Pan troglodytes (chimpanzee): 459700
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Entry
459700 CDS
T01005
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X4
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
459700 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptr04040
]
459700 (SCN2A)
Ion channels [BR:
ptr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
459700 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
459700
NCBI-ProteinID:
XP_024210469
Ensembl:
ENSPTRG00000012591
VGNC:
14354
LinkDB
All DBs
Position
13:67266525..67419839
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AA seq
1271 aa
AA seq
DB search
MCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSSVLSVG
NLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
SNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVV
LNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKRKIREFIQKAFVRKQK
ALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIGSSVEKYVVDESDYMS
FINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATSSSEGSTVDIGAPAEG
EQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKTCYKIVEHNWFETFI
VFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQVYFTNAW
CWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAI
PSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQ
TARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFV
IFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIP
RPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEMTNILYWINLVFIVLF
TGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIG
RILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDM
FNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGSSVKGDCGNPSVGIF
FFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIE
FAKLSDFADALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDA
LRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIIIQRAYRRYLLKQKVKKVSSIYKK
DKGKECDGTPIKEDTLIDKLNENSTPEKTDMTPSTTSPPSYDSVTKPEKEKFEKDKSEKE
DKGKDIRESKK
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgatttgggactgttgtaaaccatggttaaaggtgaaacaccttgtcaacctg
gttgtaatggacccatttgttgacctggccatcaccatctgcattgtcttaaatacactc
ttcatggctatggagcactatcccatgacggagcagttcagcagtgtactgtctgttgga
aacctggtcttcacggggatcttcacagcagaaatgtttctcaagataattgccatggat
ccatattattactttcaagaaggctggaatatttttgatggttttattgtgagccttagt
ttaatggaacttggtttggcaaatgtggaaggattgtcagttctccgatcattccggctg
ctccgagttttcaagttggcaaaatcttggccaactctaaatatgctaattaagatcatt
ggcaattctgtgggggctctaggaaacctcaccttggtattggccatcatcgtcttcatt
tttgctgtggtcggcatgcagctctttggtaagagctacaaagaatgtgtctgcaagatt
tccaatgattgtgaactcccacgctggcacatgcatgactttttccactccttcctgatc
gtgttccgcgtgctgtgtggagagtggatagagaccatgtgggactgtatggaggtcgct
ggccaaaccatgtgccttactgtcttcatgatggtcatggtgattggaaatctagtggtt
ctgaatctcttcttggccttgcttttgagttccttcagttctgacaatcttgctgccact
gatgatgataacgaaatgaataatctccagattgctgtgggaaggatgcagaaaggaatc
gattttgttaaaagaaaaatacgtgaatttattcagaaagcctttgttaggaagcagaaa
gctttagatgaaattaaaccgcttgaagatctaaataataaaaaagacagctgtatttcc
aaccataccaccatagaaataggcaaagacctcaattatctcaaagacggaaatggaact
actagtggcataggcagcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtca
tttataaacaaccctagcctcactgtgacagtaccaattgctgttggagaatctgacttt
gaaaatttaaatactgaagaattcagcagcgagtcagatatggaggaaagcaaagagaag
ctaaatgcaactagttcatctgaaggcagcacggttgatattggagctcccgctgaggga
gaacagcctgaggttgaacctgaggaatcccttgaacctgaagcctgttttacagaagac
tgtgtacggaagttcaagtgttgtcagataagcatagaagaaggcaaagggaaactctgg
tggaatttgaggaaaacatgctataagatagtggagcacaattggttcgaaaccttcatt
gtcttcatgattctgctgagcagtggggctctggcctttgaagatatatacattgagcag
cgaaaaaccattaagaccatgttagaatatgctgacaaggttttcacttacatattcatc
ctggaaatgctgctaaagtgggttgcatatggttttcaagtgtattttaccaatgcctgg
tgctggctagacttcctgattgttgatgtctcactggttagcttaactgcaaatgccttg
ggttactcagaacttggtgccatcaaatccctcagaacactaagagctctgaggccactg
agagctttgtcccggtttgaaggaatgagggttgttgtaaatgctcttttaggagccatt
ccatctatcatgaatgtacttctggtttgtctgatcttttggctaatattcagtatcatg
ggagtgaatctctttgctggcaagttttaccattgtattaattacaccactggagagatg
tttgatgtaagcgtggtcaacaactacagtgagtgcaaagctctcattgagagcaatcaa
actgccaggtggaaaaatgtgaaagtaaactttgataacgtaggacttggatatctgtct
ctacttcaagtagccacgtttaagggatggatggatattatgtatgcagctgttgactca
cgaaatgtagaattacaacccaagtatgaagacaacctgtacatgtatctttattttgtc
atctttattatttttgggtcattctttaccttgaatcttttcattggtgtcatcatagat
aacttcaaccaacagaaaaagaagtttggaggtcaagacatttttatgacagaagaacag
aagaaatactacaatgcaatgaaaaaactgggttcaaagaaaccacaaaaacccatacct
cgacctgctaacaaattccaaggaatggtctttgattttgtaaccaaacaagtctttgat
atcagcatcatgatcctcatctgccttaacatggtcaccatgatggtggaaaccgatgac
cagagtcaagaaatgacaaacattctgtactggattaatctggtgtttattgttctgttc
actggagaatgtgtgctgaaactgatctctcttcgttactactatttcactattggatgg
aatatttttgattttgtggtggtcattctctccattgtaggaatgtttctggctgaactg
atagaaaagtattttgtgtcccctaccctattccgagtgatccgtcttgccaggattggc
cgaatcctacgtctgatcaaaggagcaaaggggatccgcacgctgctctttgctttgatg
atgtcccttcctgcgttgtttaacatcggcctccttcttttcctggtcatgttcatctac
gccatctttgggatgtccaactttgcctatgttaagagggaagttgggatcgatgacatg
ttcaactttgagacctttggcaacagcatgatctgcctgttccaaattacaacctctgct
ggctgggatggattgctagcacctattcttaatagtggacctccagactgtgaccctgaa
aaagatcaccctggaagctcagttaagggagactgtgggaacccatctgttgggattttc
ttttttgtcagttacatcatcatatccttcctggttgtggtgaacatgtacatcgcggtc
atcctggagaacttcagtgttgctactgaagaaagtgcagagcctctgagtgaggatgac
tttgagatgttctatgaggtttgggagaagtttgatcccgatgcgacccagtttatagag
tttgccaaactctctgattttgcagatgccctggatcctcctcttctcatagcaaaaccc
aacaaagtccagctcattgccatggatctgcccatggtgagtggtgaccggatccactgt
cttgacatcttatttgcttttacaaagcgtgttttgggtgagagtggagagatggatgcc
cttcgaatacagatggaagagcgattcatggcatcaaacccctccaaagtctcttatgag
cccattacgaccacgttgaaacgcaaacaagaggaggtgtctgctattattatccagagg
gcttacagacgctacctcttgaagcaaaaagttaaaaaggtatcaagtatatacaagaaa
gacaaaggcaaagaatgtgatggaacacccatcaaagaagatactctcattgataaactg
aatgagaattcaactccagagaaaaccgatatgacgccttccaccacgtctccaccctcg
tatgatagtgtgaccaaaccggaaaaagaaaaatttgaaaaagacaaatcagaaaaggaa
gacaaagggaaagatatcagggaaagtaaaaagtaa
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