Pan troglodytes (chimpanzee): 472727
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Entry
472727 CDS
T01005
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
472727 (HMBOX1)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
472727 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
472727
NCBI-ProteinID:
XP_016814777
Ensembl:
ENSPTRG00000020127
VGNC:
12232
LinkDB
All DBs
Position
7:37250156..37416301
Genome browser
AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
NNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGANEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcttagttcctttccagtggttttgctggaaaccatgtctcattatacagatgaaccc
agatttaccatagagcagatagatctgcttcagcgacttcggcgtactggaatgactaaa
catgaaattctccatgccttggaaactttggaccgtcttgatcaagagcatagtgacaag
tttggaagaaggtccagctatggaggaagttcatatgggaatagtactaacaatgtccca
gcatcttcctctacagctacagcttccacacagacgcagcattcgggaatgtccccgtca
cctagcaacagttatgatacttccccacagccttgcactaccaatcaaaatgggagggag
aataatgagcgattatctacatccaatggaaagatgtcaccaactcgctaccatgcaaac
agcatgggtcagaggtcatacagttttgaagcctcagaagaggacctagatgtagatgat
aaagtggaagaattaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatctctcattggctgttgcagcagggatcagacctgagtgaacagaagaaaagagca
ttttaccgatggtatcaacttgagaagacaaaccctggcgctacactaagtatgagacca
gcccccattccaatagaggaccctgaatggagacaaacgcctcccccagtctctgccaca
tctggtactttccgactgcgacgagggagtcgatttacctggagaaaggagtgcctggct
gttatggaaagttacttcaatgagaatcaatacccagatgaagcaaagagggaagaaatt
gcaaacgcttgcaatgcagttatacagaagccaggcaaaaagctgtcagatctggaaaga
gttacctccctgaaagtatataattggtttgctaacagaaggaaggagatcaagaggaga
gccaatattgaagcagcaatcctggagagtcatgggatagatgtgcagagtccaggaggc
cactcaaacagtgatgatgtcgacgggaatgactactctgagcaggatacttggcaagta
cgcaatggggaggaggaggagggaagaagttcagagggaggcagagaagcagagaaggat
gacagtacgagccatagtgaccaccaagaccccatctcattagctgtggaaatggcagca
gtcaaccacactatcttggcattggcccgacaaggagccaacgaaatcaagacagaggcc
ctggatgatgactga
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