Puccinia triticina (wheat leaf rust): PtA15_14A58
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Entry
PtA15_14A58 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtA15_14A58
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_14A58
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
PtA15_14A58
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_12
TPR_19
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_14
TPR_22
TPR_6
ARM_TT21_C
TPR_7
COG4_N
TPR_20
TPR_21
BTAD
Motif
Other DBs
NCBI-GeneID:
77804121
NCBI-ProteinID:
XP_053026732
LinkDB
All DBs
Position
14A:complement(join(1008330..1009616,1009709..1012085,1012165..1012838,1012956..1013025,1013135..1013329,1013399..1013844))
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AA seq
1682 aa
AA seq
DB search
MYRSDIGLQTPYEHTPQPDSTTTYPTLLEETTWAKKVFSTSIMYLHNTQFEFFFTSWSIL
DVRCDRAKSAPSSGPKRSGVTARPPDGTLRGADGVRNHLTGAQVIQGIIMATLKTHLKSA
RDAITAKDWEKALASAEGALAIDNQSYSAYVFLGVAQLNLKRVSESEAAYRAAIKIDQVQ
PLAWQGLISLYEQQHDIDRLIADAQSLMHIWKEKGEAEKLGLLMLKMITLPQKSRKQSVA
VLSLVLGDSPFHSLLSTLPEPDHTNPEASPLLKLQLMLANTLPTLHEIIELVQTEQDETI
SREISKRRTRLTSVPKTAAQTRAEVINEVYPSSLLPQYWQQVLDHPLAGDETRREVEAKL
LAFYIDWLESLPSPFADEIPNSTKRIETGSTAESHASSRLKKQEAKDSIRHKIEDLAQGQ
AILRISNQKAWDIVLDWGEVLPDGQSTDSYGFLKNLPDAMPDAPLSTLVRAFQQIHNEAE
EEEDVAFEDPLEQIELSFEGAQDHSILSHVLAASVYFDLKEWSTVIQIAQGGLTKLTKLE
KTIGKRLPTLKRRLTIHLACALTYESPPVHHLRATRYLDAILSDEPNNGHILMAKACVLR
HSKQWKLANDFYSRSLEALPHLTSQERLEMRLQQACCLFEIGNINLAMQNLEQIVEGCEE
LVEEDADNQEASHTLAQTWYRLGRCKWAQSHPEDQNCAGSDASDLEEIKHGAYTCFIKSI
KCDTSIASSFTYLGLYYDEQNDHTRSSKCYQRAFELDATQEVAAFKLASEFADNRQWDLV
AVVTKRLLFGGVSEKIQFNSEEDGPTNLINLASYQQHVWAWKAAGVVELSEGKYTAAINT
FQRAIRCSPNDHQIMLKLGLAYQGAGKHVAALKSFIAARQLIDKSVEETSPPDSGGSSAW
YVDYCIGDSQRQLGLLEPAIKNLGKIVENRPEQLGVKVILAETKYTMGLKNSEKGAFAEA
ECELTQCLDIVRDVLEKTKSRLVIKAGWKIAGNVFAEFARWNRTIPMTTFLVDAGESDSN
EQLRAHLSYFVNLAAKMNVDNILANVKSVNCLETSAILSENGSPGIFLLLSALAFKVRLV
IELSESQKNSAADAWSDLAIALGGLSRWLDSTLSKTSSSDPSSFFKTQMGPQATLSEAVH
CIKAGLQMNSFSSGAWNTLGVLTFNLNPRLSQHAFIRSVELVPKNHIAWTNLGFFYVTHS
DLDLANQAFERAQLIEPDWSLSWMGQGLIASLNGQQQKAGELVEHAYSLSLGSITTIESC
YATVTLKTFTNDAPKSSQHTSTLIAPMLAAEKLLKRYPKDPTFLNLHALISECLGNFDEA
AQSLGKSAELLEAVYEVTESTEVERRYMLANLNLGRIRLRQKDYEEAISALETVLSLRPP
FDKNTETIECALQSTVIRVQAACQIAMARYFSQDAEQCLVGLDKALRELHGIQLDESLGL
SKELAPYSSAVSGIIARVLWAQSKESKAKEMISDVILKNSSEKFIDYDLINSLLAITILE
GGSDEALQTALNTTDESNGESTEQSLGSGEQVPVHESMDEAQIHRKANVEIISRLEELIL
RTTRNKRITRDTKSETNTILNFLEFTIKLLDERPSHNGHAFVKSFETVKEILGSCIREVR
ETEADKQLIKQRAIIFKSFDEQLAVSDLAASNEDHSDHPGGQTGDFIDETTISLADQLNF
LV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtacagatccgacatcggtctccagactccgtatgaacacacacctcagccagacagc
accacaacctacccaacactcctggaagagacaacctgggcgaagaaggtgttttcaacg
agcattatgtatttacataatactcagtttgaatttttcttcacatcttggagcatcttg
gatgtgaggtgcgatcgagctaaatcagccccgtcgagtggcccgaagcggtcgggagtc
accgcccgaccacccgatgggacactccgaggggctgatggcgttcgcaaccacttgacc
ggggcccaagttattcaaggcattatcatggcgacccttaaaactcatttgaagtcagct
cgggatgcaattactgccaaagactgggagaaagccctcgcgtcggccgagggggcattg
gcgatcgacaaccaatcgtatagcgcttacgtgttcttgggtgtagctcagctgaacttg
aagagagtatccgaatctgaggctgcctatcgagcagcaatcaaaatcgatcaagttcag
cctctcgcctggcaaggcttgatttccctgtacgaacaacaacatgacatcgatcggctg
atcgccgatgcccagagcctaatgcacatttggaaagaaaagggtgaagctgagaagctt
gggttgttgatgttgaagatgatcactcttcctcaaaaatcacgtaagcagtctgtcgct
gtactgtctctcgtcttgggcgactcgccatttcattcgttactatcaacgcttcccgaa
ccggatcataccaatcccgaggcatcaccccttctcaaacttcaactcatgcttgccaac
acattgccgacgttgcatgaaataattgaattggttcaaactgaacaggacgagactatc
tctcgcgaaatctccaaaagacgtactcgattaacttcggtccctaagactgccgcccaa
actagagcggaggttataaacgaagtctatccttcaagcctacttcctcaatattggcag
caagtattagatcatcctctcgctggcgatgaaaccagaagagaagtcgaagcaaagttg
ttggcgttttatatcgactggcttgaatctttaccctctccatttgccgatgaaataccc
aactcaaccaaacgcatcgaaaccggctcgacagccgaatcacacgcttcttccaggcta
aaaaaacaggaagctaaagattccattcgtcataaaatcgaagacttggcccaagggcaa
gcgattctcagaatttccaatcagaaggcttgggatattgtacttgattggggcgaagtt
ctgcctgacggccaatcaacggattcctatggcttcctaaagaatcttcccgatgcaatg
cctgacgcgcccctatcgacccttgtgcgagccttccagcaaattcataacgaagcggaa
gaggaagaagatgtcgcctttgaggatccgcttgagcagattgagctttcttttgaaggg
gctcaagaccactctatattatcccatgtccttgctgcgtcggtgtacttcgacttgaaa
gagtggtcaacagtcatccaaatagcccaaggaggtctcaccaaattgaccaagctggaa
aaaacaattgggaaacggctaccaactttaaaacgacggttgacgattcacttggcttgt
gctctcacttatgaaagcccacctgttcaccatttacgtgccactcgctacttggatgca
atcttatcggatgaaccgaacaacgggcatatcttgatggccaaagcgtgtgtcctacgg
catagcaaacagtggaagctggctaacgatttttactcgcgttctcttgaagctttgcct
cacttgacttctcaggaacggcttgagatgcgattacaacaggcttgctgcctttttgaa
atcggcaacataaacctcgcgatgcagaatctggagcaaattgttgaaggctgtgaagaa
ctagttgaagaggatgcagataaccaagaagctagtcatactcttgctcaaacttggtat
cgtttgggaagatgtaaatgggctcagagtcacccagaggatcaaaattgcgcaggatct
gatgctagtgacctcgaagaaatcaagcatggcgcctacacttgttttatcaaatcaatc
aaatgtgacacttcgattgcttcttccttcacctaccttggattatattacgatgaacaa
aatgatcatactcggtcttcaaaatgctaccaaagagctttcgaactggacgctacgcag
gaagtcgctgctttcaaattagcgtcggagtttgcggataacagacaatgggatcttgtt
gcagttgtgacgaagcgactcctttttggaggtgtctcggaaaagattcaattcaactcc
gaagaagatggaccgaccaacttgataaatcttgcgagctatcaacagcacgtctgggcg
tggaaggcagctggagttgttgagctgagcgaagggaaatataccgctgcaatcaacacg
tttcaacgtgctatccgatgctctcctaacgatcatcaaatcatgttaaaattggggttg
gcttaccaaggcgctggaaaacacgtcgccgctcttaaatcttttattgccgctcgtcag
ctgatcgacaagtcagttgaagagacttcgccacccgattcaggaggctcctccgcttgg
tacgtagattattgcattggcgattctcagcggcaactcggcctcctcgaacctgctatc
aaaaacttggggaaaatcgtcgaaaaccgacccgaacagctcggtgtcaaggtcattttg
gctgagacgaaatataccatgggcctgaagaattctgaaaagggggctttcgctgaagct
gaatgtgaactgactcaatgcctggatattgttcgagatgtccttgaaaaaactaaatct
agattagttattaaagccggctggaagattgccgggaacgtattcgccgagtttgctcgg
tggaaccgcaccattcccatgaccacttttctggtcgatgcaggcgaaagcgactcgaat
gaacaactaagggcccacctttcgtattttgtcaatctcgcagcaaagatgaatgtcgat
aatatcctggcgaatgtcaaatctgtcaactgcctggagacgagtgcgattctctcggag
aatggctctcctggaatatttcttttgttatccgctctcgcctttaaagttcggctggtc
atcgagctatcagaaagtcagaagaatagtgcggcggatgcttggtctgatctggcgatt
gcattaggaggtctcagtagatggcttgattcgactttaagcaagacttcgtcaagcgac
ccttcgagcttctttaaaactcaaatgggcccacaggccactttatctgaagcagtgcac
tgtatcaaagctggcctgcagatgaactccttcagttccggagcctggaataccctcggt
gtcttaaccttcaatcttaatcccaggctctctcaacatgcatttatcagatccgtcgag
cttgtgccgaagaaccatatcgcttggactaaccttggcttcttctatgtgacccattct
gacttggacctggcgaaccaagcttttgaaagagctcagttaatcgagcccgactggtcg
ttatcttggatgggccaaggtttgatagcttctctaaatggccaacaacaaaaagccggc
gagctggttgaacatgcttacagtctgtctcttggaagtatcactacaatcgagtcttgt
tacgccacggttacgttgaagacgtttaccaacgatgcaccaaagtcgtcacagcacacc
agcacgctgattgctccgatgttagctgccgaaaagttattgaaacgatatccgaaggat
ccaactttcttgaatctgcatgcgcttatttcagaatgtttaggaaacttcgacgaggct
gctcaaagtttgggaaaatcagccgagcttttggaggcagtctacgaagtgacagagtca
actgaagttgaacgacggtacatgttggcaaacttgaatttaggtcgaattcggttgcgt
caaaaagattacgaagaagctatcagtgcactggagacagttcttagcttgaggcctcca
tttgataagaataccgaaacaatcgaatgtgctcttcaatcaacagtgatccgagtccaa
gcggcctgtcagatcgcaatggcccgatacttttcacaagatgctgaacagtgtctggtt
ggccttgacaaagctcttcgtgaattgcacggtattcagctggacgaatcattaggactt
tctaaagagttggcgccctattcatctgctgtatcaggaatcattgccagggtactctgg
gcacaatcaaaggaatcgaaagctaaagaaatgatatcagacgtgattttaaagaattca
tccgaaaagttcatcgattacgatttgatcaattccttgttggccattacaattcttgaa
ggaggatcggacgaagcactccagacggctctcaacaccacagatgaatccaatggcgaa
tcaacggaacaaagtctggggagcggggaacaagtgccagtccatgagtcgatggatgaa
gcccagattcataggaaggccaacgtagaaatcatatcaagacttgaagaattgattctc
cgaactacacggaacaaaaggatcacgcgggataccaaatcagaaaccaacacgatactc
aactttttggagttcacgatcaagttattagacgagcgcccaagccacaatggacatgct
ttcgtcaaatccttcgagactgtcaaggagattttgggcagctgcattagggaagtgagg
gaaactgaggccgacaagcaattgattaaacagcgagctatcattttcaaatcttttgat
gagcaactcgccgtttcggatctcgccgcaagcaatgaagatcattccgaccatccaggg
ggccagactggggatttcatcgatgaaactacgatctctttggctgatcagttgaatttc
ctcgtttaa
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integrated database retrieval system
