| Entry |
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| Name |
(RefSeq) uncharacterized protein
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| KO |
| K12604 | CCR4-NOT transcription complex subunit 1 |
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| Organism |
ptrc Puccinia triticina (wheat leaf rust)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ptrc00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtA15_16A40
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ptrc03019]
PtA15_16A40
Messenger RNA biogenesis [BR:ptrc03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PtA15_16A40
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PtA15_16A40
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
16A:complement(join(318102..318493,318560..319284,319360..319956,320035..320279,320352..320654,320724..320842,320914..321238,321308..321460,321541..321771,321837..321961,322025..324308,324414..326153,326236..326394))
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| AA seq |
2465 aa
MNTTPTPPPGLSVLSAQQQRANELAKIAKTQIVFKIGGLTEENFAYAQQEIQAVVRQNPG
DTDLFYIQRLIHASVSALGFQSNHLLSNNLLLNSPSQSQLALRLLTSELKKLARDPFSAH
KFTDALNSGLNSGGHAEDAFDLKTFVNKIHLVGLELVILLHPLVSLPHLSSGPPLPSGSL
PPGLPPPLGHNPSVLAKKRQIAKDAVQILRDSIGVALHSLSIPINPAAGVGSDTPSGAAS
DEQMPELTPIQLSKLLSIIISDTPVPATEDGKEPELLWSATVQRATVQAIVSRVGQELTS
QIANHCLADARFTSNPSPITLLYRICSDPVICSADLCKTVLLKTKRGCGPETEEVGDQLA
ELIELANKYGNEFPIDHVSWIRAIGEVYNNRIRWSEVIRFTFDQPAEQVTLPDGWGLRFL
GKVLSLAPSLAVSPSDRASPTSATKTSNPPPQVEPSQGPPSSKEQSLSTSSQSSLPPSPT
VHKNTLPSQSPATSTAAISSLFEKWSHQYTKIRLIDRLLYLPLDASPFLHALKPNPLAPM
NGPSCKKVVSAEDVSNNSPTVRVLAKSVEMSGWNVKELLCEVAKLLAPQYSFQEGQKEKD
ETVDKIIEKATDIMERACKTNPELVMMALIQVPTPWATLHNDLTARLLQSFLKGHPSHQL
VFLRIWQLDPDFLMTALRDFYHENEMNVTRVLDITQDLKILDQVLNYQPDVNMIIDIASL
ASRREYLNLEKWLGDRIAQYGSSFINGCLDFLSKKVKHDLLRQSIVNQDNSPAPLPESAT
LSLSAPTVSIFIRTIRMNHELLSLEELERFKETRTQAIQLHPKLMNFMPGNEDEPGMQVS
SFDSRIEAEVDSFYKKMYDLELTVDHIILILKSMRDSPDLKNHQFLACLLSGLFDEYKFF
STYPSKELNLTASLFGSLIREQLIGYVPLGIGVRYVLDAIRNPIESKWYEFGSMALSKFV
NRLEEWPQLALAVSEVESLKLTHPDVYLRAKTVLNGENYKDVYLSTIVGDPDEDAENNSK
PKEANEDGEDDPRVVFAAIKSDDDLILREIRRRKKLAALDAAAGRPTEPEDRSSNHKLIT
SKMEFVEPEEHISDKILFIINNLAFNNLETKLTEMSSQIKPEHYNWFAKYLVNHRVSIEP
NNHSLYLQFLDKLALPHMYKKINNETLIKCVIMLNSEQTLKSGTDRTILKNLASWLGSLT
LAKNLPIKHHNIAFKDLLLQGFRSNRLIVAIPFVCKVLEQSSKSKVFRPPNPWLMGILKL
LIELYHYGELKLNLKFEIEVLCKALEVELKDVKPTEMLKKQDELSQQRQEVEEVKAAARS
LAAAQQQQAEQHSHLSIENVIGRATGTLNPNNAPSGGTSITATQPLENAGPNNLPAGSHS
LSLNGQAGYASSLQELLKQALLELPLLMTFSTEIVLNNNILWKRVVFTSIERAIRDIIGP
VVERSVTIANISTREMILKDFAMEGKEDQMRTSAHMMVKNLAGSLALVTTKEPLRNQILV
NIRTLSTQNGFPDHNVSDEEIQQVTADNLDVACQVIEKVATDKAILEIDNSLAAAYEARR
RHREHTNSAFWDTSAMAASHYSGMLPNPLKLKLGGLEPEQLRIYEEFANVRDDTNSSNAI
AAQQQQHSWQSQQQQQQQQQQQQQQQQQHQQLQLQQQQQQQHQQFQPQGPVPGLDATRSP
ALAENPPNLTIGQSEEANRPINPISDALVRINSLASEIERLVLTITAESLAEIDENHEIR
GLINEILKMLRQASPTLKDQLTLSFAQKSVAMLYRSESKLGRDLFVNLLEEICEMTPKVA
HEVSQWLLYAEDERKYNVPVTLVLITHRIVSLGDFDAQSAKLIVRDYKPSLMNYVAEFIE
ACVMGSESSLIPIGLLKHSIQALQRAIQIGRATPKVSSIMQNIQDKLPALGSAKDLGPVT
IKSINDEAGLREQLSFCFAEWVRMYSSSYSVEKPFIEFISSLQAHGILKGEEVSSLFFRV
CMEVSIDAYIKAKASGSTAARGIFQPVDAFARLISLMIKYHTDPTGIDIERAKTHYMSKL
LSIVLMVMGQFHKELGEHFQQKPFFRFFSGLLVHINALEVHLGSCYQSVMMTLSNLIESM
QPSNFPGFTTSWMALISHRLLMPKLLMFKDREGWSTVHRLLLGHLRFLRPFLASGTLDDV
GRTLYTGTVRIFLVLLHDFPTFLSVYHHSLCSALPPHCIQLSNLILAAFPLGVRLHDPFV
PGFSLESLPESRVSPTIISDFTHSLEQADVRQLVDKAIAGASSPLVAVPSIKDRLANPPK
PTEGSVYDIPLVNSLVLYLGVQAILRVDREAGSLYDATCPSAVVFKQLVTEIDPEGRYLL
LVAAIQQLRWTNSHTLWYSSLLIDSFMSTESEVVKEQIARVFLERLLVQRPHPFGMIYAF
IKFLGHCGAPASSHPLNRHQRLAESEDAGSQRRTPSSLENLKVVKKSQELMALFSICRKH
VVQIN |
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| NT seq |
7398 nt +upstreamnt +downstreamnt
atgaacaccacccccaccccgccccctggactctccgtcctctccgcgcagcagcagcgg
gcaaacgaactggccaaaatcgcaaagacacagatcgtcttcaagatcggcggactcacc
gaggaaaactttgcatatgcccagcaggagatccaagccgtcgtccgccaaaaccctggc
gacaccgatctcttctacatccagcgcctcatccacgcctccgtctccgccctcggattc
cagtccaaccatctgctctccaacaacctcctcctcaactcgccctcccagtcccagctc
gcactccgactgctcacctccgagctcaagaaactcgcccgcgaccccttctcagcccac
aagttcaccgacgccctcaactccggcctcaactcgggcggccatgccgaggatgccttc
gatctcaagacgttcgtcaacaagatccatctcgtcggcctcgaactcgtcatcctcctc
caccccctcgtctccctcccccatctctcctccggccctcccctgccctccggctccctc
ccacccggcctccccccacctctgggccacaaccccagcgtgctcgccaaaaagcgccag
atcgccaaggatgccgtccagatccttcgcgactccatcggcgttgctctccacagcctc
tccatccctatcaatccggcagccggcgtcggatccgataccccctcgggcgccgcctcc
gacgaacagatgcccgagctcacgccgatccagctctccaagctgctctcgatcatcatc
tccgatacccccgtgccggctaccgaggacggtaaagaacccgaactgttgtggtcggct
accgtccagcgggcgaccgtccaagccatcgtctcaagggtcggccaggagctcacctcc
cagatcgccaaccattgtctggcagacgccaggttcacctccaacccaagcccgatcacc
ctcctctaccggatctgctccgatccggtcatctgctcagccgatctctgcaaaaccgtc
ctgctcaagaccaagcgggggtgtggcccggaaaccgaagaggtgggcgaccaactggcc
gagttgatcgaactcgccaacaagtatggcaacgagttcccgatcgatcatgtcagctgg
atccgagcgatcggcgaggtctacaacaaccggatccgttggagcgaggtcatcagattc
accttcgatcaacccgccgagcaagtcaccctacccgatggctggggactgcgcttctta
ggtaaagtcctcagcctcgcaccttccctcgccgtctctccatccgatcgagccagcccg
acctcggccacaaagacgagcaatccgccgcctcaagtcgagccatcccaaggccctccc
tcctccaaagaacaatccctctccacctcctctcaatccagcctgcccccttcacccacc
gtccacaaaaacacactaccatcccagtcccccgcaacctccacagcagccatatcgagt
ctattcgaaaagtggtcccatcagtataccaagattcgattgatcgatcgattgctctac
cttccactcgacgcttccccctttttgcacgccctcaaacctaatccgctggcgcccatg
aacggcccgagctgcaaaaaagtggtttcagccgaggatgtatcgaacaactcacccacc
gtcagggttctggccaagtctgtcgagatgagtgggtggaacgtcaaggaactcttgtgt
gaagtcgccaagttacttgccccgcaatattcgtttcaagaaggccaaaaggagaaagac
gagacggtagataagatcatcgagaaagcaaccgacattatggagagagcttgtaaaacg
aaccccgaactagtcatgatggctttgattcaagtccctacaccttgggcgacgcttcat
aacgacctgacggcacgactactccagtccttcctcaaaggacacccttcccatcagctg
gttttcctgcgaatatggcaactggaccccgactttttgatgaccgctctgcgagacttt
tatcatgaaaacgagatgaatgtcactcgggtcttggacatcacccaagatctcaagatc
ctcgatcaggtattaaactatcagcctgatgtcaacatgatcatcgacatcgcatcgcta
gctagtcgacgggagtacctgaacttggagaaatggctcggtgaccggattgcccaatat
ggaagttcgttcatcaacgggtgcttggacttcttgagcaagaaggttaaacacgatctg
cttcgacagtcgatcgtcaatcaagacaacagtccagcacctcttccggagtcggccacc
ctcagtcttagtgccccgactgtatcgattttcatccggacaatccgcatgaatcatgag
ctgctgagtttggaagagctggagcgcttcaaagaaacgcggactcaggcgattcagctc
catccaaaactgatgaatttcatgccgggtaatgaagacgaacccggaatgcaggtctca
tcatttgattcgagaatcgaggctgaagtggattcgttttacaagaagatgtatgatctc
gaattgacggtcgaccacatcatcttgatcctcaaatcgatgcgagactcgccggacttg
aaaaaccaccagtttcttgcttgcttactgtccggcctgtttgacgaatacaagttcttc
tccacttacccgtccaaggagctcaatctcactgcatcactcttcggttctttgatccga
gagcaactaataggctatgttcctcttggaatcggtgtccgatacgtcctagatgccatc
cggaatcctatcgaatccaagtggtacgagtttggtagcatggcccttagcaagtttgtc
aatcgactagaagaatggccccagctagcattggccgtatccgaggttgaatcgctcaaa
ctgacccatcctgatgtctacctgcgcgccaaaaccgttctgaatggcgaaaattacaaa
gacgtttacctctcgaccatcgtcggcgaccctgacgaagatgctgagaacaactcgaag
cccaaggaagcaaacgaggatggggaggatgatccccgagtcgtcttcgctgcaatcaag
tctgacgatgacttgatcttacgagaaatccgtcgcaggaaaaaactggccgctttggat
gctgctgccggccgtccaaccgaaccggaagaccgatcgagtaatcacaagttgatcact
tccaagatggaattcgtcgaacctgaggaacatatttccgacaagatcctcttcatcatc
aacaacttggctttcaacaatctcgaaactaagctcacggagatgtccagccaaatcaag
ccagagcactacaactggtttgcaaagtacctcgtcaatcaccgagtctccatcgaaccc
aacaatcattcactctacctgcaatttctagacaaacttgccctccctcacatgtataaa
aaaatcaataacgagactctcattaagtgtgtaatcatgctcaattccgagcaaacactc
aaatcaggaacggatcggacaatattgaaaaacttggcatcttggctcggctcactgacc
ttggcgaaaaacctaccgatcaagcatcacaacatcgccttcaaagacctcttactccaa
ggtttcagatccaaccggttgattgtcgccattccattcgtgtgcaaggtactcgagcag
tccagcaaatcgaaagtcttcaggcctccgaatccatggttgatgggcatcctgaagcta
ctcatcgaactctatcattacggagagctgaagttgaatctgaagtttgagatcgaagtg
ctctgtaaggccttagaggtcgagttgaaggatgtcaagccgacggagatgttaaagaaa
caggacgagctcagccaacaacgccaagaggttgaggaagtcaaagctgcagcccggtcg
ctcgcggcggcacagcaacagcaggccgagcaacacagtcatctctcgatcgaaaacgtc
atcggacgggcgaccggcaccctgaatcccaataacgctccctccggtgggacctccatc
accgctacccaacccttagaaaatgcgggccctaataaccttccagctggctcgcatagt
ctgtcgctcaacggacaagctggctatgctagcagtctgcaagaactgttgaagcaggcc
ctgctcgagttgcctctgttgatgacattttcaaccgagattgttttgaataacaacatc
ctgtggaagcgagtcgtttttacctctatcgagagagctattcgagatatcattggccca
gtggtggaacgatcagtgacgattgcgaacatctcgacccgagagatgattttgaaagac
ttcgccatggagggcaaggaagatcagatgcgcacttcggcacacatgatggtcaaaaac
ttggcgggctcgctcgctttggtcaccactaaagaaccgctacgcaaccaaatcctcgtc
aacattcgcacgctttcaacccagaatgggtttccagatcacaatgtctcagatgaggag
attcaacaggtgaccgctgataatttggacgtggcctgtcaggtgatcgaaaaggtggcc
acggataaggctatccttgagatcgacaacagtctagcagctgcttatgaagctcgtcga
agacaccgcgaacataccaacagcgccttttgggatacctctgccatggccgcctctcat
tactctggaatgttgcccaatcccctcaagctcaaactaggtggtctcgagccagaacaa
ctgcgaatatacgaggagtttgccaatgtccgggacgataccaattcttccaatgctatt
gctgcacaacagcaacagcactcgtggcaatcccaacagcaacaacaacaacagcagcag
cagcagcagcagcaacaacaacaacaccagcaattacaacttcagcagcagcagcaacaa
caacatcaacagtttcaaccccaaggtcctgtcccaggccttgatgcgactcgatcccct
gccctggccgaaaacccgcctaacttgaccattggtcaatccgaagaagcaaaccgccca
atcaatccgatttcagatgctttggttcgcatcaattcattggcaagtgagatcgaaaga
ctggttctgacgatcaccgccgaaagcttagccgagattgacgagaatcacgagatccgc
ggcttgatcaatgagatcttgaagatgcttcgccaagccagtccgacgctcaaagaccag
ttgaccttatcgtttgcgcaaaagtccgtcgccatgctttaccgctccgaatccaagctg
ggccgcgatctgtttgtgaacctcttggaagagatctgtgagatgacgccaaaagttgcc
cacgaagtcagccaatggctgctctacgccgaagatgagcgcaagtacaatgtgccggtg
acattagtgctgatcacacatcggatcgtgtcccttggcgatttcgatgcccaatcggcc
aagttgatcgtccgggattacaagcccagtctaatgaactacgtcgccgagttcatcgag
gcatgcgttatgggatcagagtcttccttgattcctatcggacttttgaagcattccatc
caagcccttcaacgcgcaatccagattggtcgtgcaacgccaaaggtgtcttccatcatg
caaaacattcaggataagcttccagcgctaggcagtgccaaggatttggggccggtgacg
atcaaatcgatcaacgacgaggccgggctgcgggagcaactgagtttctgttttgcggaa
tgggtccggatgtactcgtcgtcatactcggtcgagaagccgttcatcgagttcatcagc
tcattgcaagcgcacgggatcctgaagggcgaagaagtctcgtcgctgttcttccgggtg
tgcatggaagtgagcatcgatgcctacatcaaagccaaggcgtcgggcagcaccgccgcg
cgaggaatcttccagcccgtcgacgcgttcgcccgactgatctcgttgatgatcaagtac
cataccgaccctactgggatcgacatcgagcgcgccaaaacgcattacatgtccaagctg
ctgtccatcgtcttgatggtcatgggccagttccacaaggaactcggcgaacacttccag
cagaaaccctttttccgcttcttctcggggctcttggtccatatcaacgcgttggaagtt
catctgggaagctgttatcaatcagtcatgatgaccttgagcaaccttatcgagtccatg
caaccatccaacttccccggcttcacgacatcatggatggcgttgatcagccaccggcta
ttgatgccgaagctcctgatgttcaaggatcgagaaggatggtcgactgtgcatcggctg
ttacttggccatctgcgattcctgcgaccattccttgcctcggggacgcttgacgatgtc
gggcggacgctttacacgggcacggtgcggatcttcctggtgctcttgcacgacttcccg
accttcctctccgtataccaccactcgctctgctcggccctgcccccgcactgcatccag
ctctccaacctgatcctggcggccttccccttgggcgtccggctccacgacccgttcgtg
cccggcttcagcctcgagagtctgccggagtcgcgcgtcagtcccacgatcatctccgac
ttcacccactccctcgagcaggccgacgtccgtcagctcgtcgacaaggccatcgccggc
gcctcgtcccctctcgtcgccgtcccatccatcaaggaccgactggctaatccgcccaaa
cctactgagggctccgtctacgatatccccctcgtcaacagcctcgtcctctacctcggc
gtccaggccatcctccgcgtggaccgcgaggcgggctcgttgtacgacgccacctgtccc
tcggctgtggtcttcaaacagttggttaccgagatcgaccccgaaggccgatatttgcta
ctggtggccgcgatccagcagctgcgatggacgaatagccacacgctgtggtactcatcg
ctgctgatcgacagcttcatgagcacggagtcggaggttgtcaaggaacagatcgcgcgg
gtgtttctggaacgcttgctggtccagcggccgcacccgttcgggatgatctacgcgttc
atcaagttcctcggccactgcggcgcgcctgcttctagccatccgcttaaccgccaccag
cggctcgctgagagtgaggacgctggctcccagaggaggaccccgtcgtccctcgagaac
ctcaaggtcgtcaagaagtctcaggaacttatggctctcttctccatctgcaggaaacac
gtcgtccagatcaactga |
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