Puccinia triticina (wheat leaf rust): PtA15_6A227
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Entry
PtA15_6A227 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PtA15_6A227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_6A227
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PtA15_6A227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_C
THSD1_D2
MTLN
Motif
Other DBs
NCBI-GeneID:
77810805
NCBI-ProteinID:
XP_053021154
LinkDB
All DBs
Position
6A:join(1704475..1704515,1704599..1705071,1705152..1705321,1705395..1710317,1710424..1711071)
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AA seq
2084 aa
AA seq
DB search
MAQNEACKLSLVSNPIRLINQTLSGCVERTASSSRSLRQLLKLHEEKLKNCHDPYPRQSS
KSRNTIQTGKVTLSDGEIISLSDQRKANVLRISETFDIDEVDALILWLQFLHAERHTSSP
ISDADQSSPKKVTDATFEEQKFDEETMANFSSFYFEERRSALIVVASALHIAENESSAIN
DTCSQLLDLITSIETPSLMLESFIKRTKSSLPDSVRGTARQALIWTQQLMYEQKLILEVI
FLLFYGLIKPDAAHYVSVLKALQETSWGKTQACLPYFDEETSTIHLNVSNLLTLIALQAS
HTEDICSPEFALASEPTERELTHPGKLKEIYDLQLDLLQQQPLQAAPIALAWSFILHQLT
NIYLENEIPQSHQDFAELILPQSNQMNSDQDEEATPEQQDESMPLYQRWARHVLSHQCQL
FQNLSQLVSSVYCASSHNRFGAPDNNALGYLVTVRTFLSAVPIFFRISYLGKQQFEDAIN
VFGLLFRLDVQHAIASDLWRAVLGEMEVVSDVELPLATGEAEYLSSARVRFPINVGLFTG
LCRSLSGFNETPQPSDPSYQLLCTRSLLEYADQLPTLTEAIPSSQSSLLPLCYEPTLPPQ
TIDTPDGSPPDSQGWIKATRPIWISPDLQIPKHTIGKIVSGADQKSVVVCWRFTWSAWRY
WGRLLLQYAGYSGQQSNHDHHHDVFGSSSTSNPSWYEDKLETESIVNILKILTSVVECST
ELGAELIGKMVGNISHQGLIQAIFNLIENPIDMSTHTISSETTEISLRLVSALSPIFPGA
VWTLVRGSHLLFPDSSKTSHWNAIDTSGPTLKFERLSGEYGITLAILDLAQMLLLEAISS
GLTTNPTFAEIKAEVLVRALGWICEEVWPGFQNWKYRRLEDKFQIASKCCIIFNTIASET
LKTQLFSADIQTDLVVARLSQSFFSWFLTSATALTLNPLISILTTDQSVMETLRKFHRNV
ELEAFAESLSACARLARNILALKINHIPSGQPCLLERLFMAQSNRKPSSFAGLKDHSRQS
VLPFVAQWCLVAPHVDISKDACDIFAFLCFLSQDWPSDWPSISSGFGDPDSMSLFLHELA
FQGFQIRDDDGILRSSYWNLLAVLLDTQPSLGAIIVTGTASLPGSTTESVQKLQSKSPFE
LGIAAFVKCFENNNKLDITVGLSVLYFLYTVYSQTNGFLAILCQTLENQEFVDRIVDIST
SLINTPQSLLSISESRLAPLSSDDAERDLFGELEELQIKHFCNELMCKAYATRTLTVLLQ
LESDQSTMLKGMSSKSNIGLSISKELQKTPTQLRELICSAIESLANPELQSEALREINNR
YPNLDLDTYRRVDPALPYEKLQLYGNGFVYDYELVIGRIRGSDVSASVADEVMKNLIAIN
WNLSAVDAQLEVTQSWESLLEVVFQQKSITLQLGPQLSQSVLESANVIAKEIRGGDFMLN
IHSVRISILLTLVQALPVNEETSRTTIKLLESVKSLISSERFPILDSIKRRLKINWHTNF
LKLLYLIFRRCAPIKIPSLNDEQRHLMVNLVETFLRSSISILETVLTLAQISSDANYEQD
LKLSVSIFTELMNSPVRPPIMNWAHRIHDLCQPAFNLLTQEPLLDDQEPMFAEHVIRLFM
SLALDDRLAEYMASEGLIPVLLNISLTPRASEGLIEPVASNRPFERSPTHRLWCSILALV
TSLANTLCYSETFVLDEISSFARLYSPQLLKAISVISPPDHTLRGSSEMNLTLAGLEEAE
LVTNLLVVVSSKPVGRSLLSLPENYRQAMLTALQTLAHCLNHPNSTSKWLENDVTWKSSS
RLMSQTLGKTGQVVVDNGQPLPTHVQEALLHMLQVSRNILHTLVSHTRALSVLTRDVAEW
AVEYAMINPTRSIVVGDTATIGTLFELAETSLDIYRLASTRNSAPPTTSSDLSDSVNVSD
ASAVVLELSLLLASTQLALWLYSTANPESSVVGSLTYPSSHAIHKDSEMSAQAPTSPRLR
REILSDLAPDLMSSIDKGLSVIKLVNSRTTYQPRYAVNPLNRSTIKKKTIKKPFQLSYSS
TQSSPPSPSLENQSALIVNTPDNHQQTEDLLSALKRFAERYFSE
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaacgaagcttgcaagctttcattggtatccaatccaatccgattgataaat
caaaccctgtcgggctgcgttgaaaggacagcctcatcatcccgatctctgcgacagctg
ctgaagttacatgaagaaaaactcaagaactgtcatgacccctacccgcgtcaatcgtcc
aagtcgcgtaataccatccaaacaggaaaagttacattgagcgatggtgaaatcatctcg
ttatccgatcaaaggaaagcgaatgtacttcggatcagcgagacattcgatatcgacgaa
gtagatgcacttatcctatggctccaattccttcatgccgaaagacacacatcatctccg
atcagtgacgcagaccaatcgagcccgaagaaggtcaccgatgccacatttgaagaacag
aaatttgatgaggagacaatggccaatttttcttccttctacttcgaggagaggagaagc
gctcttatagttgttgcttcagcgttgcatatagccgaaaacgagtcctctgcaatcaat
gatacatgttcacagcttctggatctcatcacctcgatagaaacaccctctctgatgctc
gagtcattcatcaaacgaaccaagtcgtccctccccgatagtgtgcgcggaacagcccga
caggccttgatttggacacaacagctcatgtacgagcaaaagttgatcctcgaagttatc
tttttgctgttctatggcctcatcaaaccagatgccgcacattatgtttcagtgttgaaa
gctttgcaagagacttcgtggggcaaaactcaggcgtgtttaccttactttgatgaagaa
acctcgacgatccacttgaacgtgtcaaaccttctgacgctaatagccttgcaagcctct
cataccgaagacatctgctctcctgaattcgcactcgcatcggagcccactgaacgcgaa
ttgacccaccccgggaagctcaaagaaatctacgacttgcaactcgacttgctccagcag
cagccgctacaagccgcccccattgcgctcgcttggtcgtttatactccatcagctgacg
aatatctacctggagaatgaaattccccagtctcatcaagattttgccgagctcattctt
ccccagtcaaaccagatgaattccgatcaggatgaagaggccacccccgaacagcaagat
gagagtatgccattatatcagcgctgggctcgacatgtcttatcccaccaatgtcaactc
ttccagaatttgagtcagctagtgtcgtctgtgtattgtgcaagctcccacaatcgcttt
ggtgcgcccgacaataatgctcttggctacctcgtcactgtccgaacgttcttatctgct
gtgccgatcttcttccgaatatcctacctgggcaagcaacaattcgaggatgccatcaac
gtattcgggttgctattcaggcttgatgtgcagcatgctatagccagcgatctgtggcga
gcagtacttggtgagatggaggtcgttagcgatgtcgagctccccctcgcaaccggtgaa
gcagaatatctctcttccgcgcgagtcagattccccatcaatgttggactatttaccgga
ttatgtcgatcactcagtggcttcaatgaaacccctcaaccttcagatccgagctatcaa
cttctctgcactcgttccttactggaatatgccgatcagctacccacactcaccgaagct
attccaagctctcaatcttcgctcctacctctgtgttacgagccaaccctcccgccgcaa
accatcgatacgccagatggtagtccccctgactctcaaggttggatcaaagcaactcgc
cctatttggatctcacctgacctccaaattccaaagcacacgataggtaaaatcgtcagc
ggtgccgaccaaaagtccgtggttgtgtgctggcgcttcacttggtcggcgtggcgatat
tggggtcgactcctactgcaatatgcaggatactctggtcagcagagcaatcatgaccat
caccacgatgtctttggatcatcatcaacttcaaacccttcttggtatgaagataagctg
gaaaccgagagcatcgtcaatatcttgaagattttgaccagtgttgttgagtgcagcacc
gagcttggagcagagctgattggcaagatggttggcaatatttcgcatcaaggcctaatc
caagccattttcaatcttatcgaaaatccgatcgacatgtccactcacaccatctctagt
gaaactactgaaatatctctgcgcctcgtgtctgccctctcaccgatatttcctggcgct
gtttggactttggttcgaggctcgcaccttcttttcccggactcgtccaaaacatctcat
tggaatgctatcgacacaagtggtcccacgttgaagtttgagcggttgtctggtgaatat
ggcatcactctcgccattctggatctagctcaaatgcttctgctggaggctatctcttca
ggactcacaaccaaccccacctttgctgaaatcaaagcggaggttcttgtcagggcactc
ggttggatttgcgaggaggtttggcctgggtttcaaaattggaaatatcgtcgactggaa
gacaagtttcaaatcgcaagcaaatgttgtatcatcttcaacacaattgcttctgagact
ctgaaaacccaattgttttcggccgacattcagacagacttggtcgtcgctcgactgtct
caatcgtttttctcctggttcctcacatcagccactgcgctcactctaaatccgctgatt
tccatcctcaccaccgaccagagcgtcatggaaactcttcgcaaatttcatcgcaatgtg
gaacttgaggcgtttgccgaatcactgtcggcctgcgcacgtttggccagaaacattctc
gccctcaaaatcaatcacattccctcagggcaaccttgcttgttggagcgactttttatg
gctcagtcaaatcgaaaaccttcttccttcgctggtctcaaagatcactctcgtcaaagc
gtattgccattcgtcgcccaatggtgtctggttgctccgcatgtcgatatttctaaggat
gcatgcgatatatttgcctttctttgtttcctttcgcaggattggccttccgattggcct
tcaatcagttcaggtttcggagaccccgactcgatgagtctatttttacacgagctcgcg
tttcaaggtttccagatccgcgatgatgatggcatcctcagatcatcatattggaatttg
ctggcagtgttactcgatacccagccgtctctcggagctattattgtgactgggacggca
tccctccccggctccacaactgaatcggttcaaaagttgcaatccaagagcccttttgag
ctaggtattgcggcattcgtcaagtgtttcgagaacaacaacaagctcgacatcaccgtc
ggactgagcgtgttgtactttttgtacactgtctacagtcagacgaacggattcctcgca
atcttgtgtcaaactctggagaatcaagagtttgttgataggatcgtcgacatatcaacc
agtttgatcaacactccccaatcattactctccatatccgagagccgtctcgcgcctttg
tcgagtgatgatgctgaacgcgacctcttcggagaactggaagagctccagattaaacat
ttttgcaacgaactgatgtgtaaggcttacgcgaccaggaccctaacggttctgctccaa
ctggaatcggatcaatcgactatgttaaaaggaatgtcgagcaagagtaatattggcctg
tctatctcaaaagaacttcaaaaaacaccgactcaactgcgtgaattgatctgctccgcg
attgaaagcttggccaatccggaacttcagtctgaagcccttcgagaaatcaataaccga
taccccaatctcgacctcgatacctaccgaagagttgaccctgctttgccctatgagaag
ctccagctgtacggcaacggttttgtttacgactacgaattggtaataggtagaattaga
ggtagtgatgtatcggcttcagtcgccgatgaagtgatgaagaatttgattgctatcaac
tggaatctgtcagccgttgatgcccagcttgaagtcactcagtcatgggaatcccttctg
gaagtagtctttcagcaaaaatctatcactctccagttaggaccgcaactctctcaatca
gtactggaatcggccaatgtgatcgcgaaagaaatcagaggcggtgactttatgctcaac
atccattcagttagaatctcaattcttttgacactagttcaagcactccccgtgaatgaa
gaaacatccagaacgaccatcaaactattggaaagtgtcaagagcctaatctcctccgag
cgtttcccaatcctcgattctatcaagcgaagactgaaaatcaattggcacacgaacttt
ctcaagttgctttacctaatcttcaggcggtgtgcgccaatcaagatacccagtctgaat
gatgaacaaaggcacttgatggtcaacctggtggagacgtttttgaggtctagcatctcg
atcttggagaccgtcttgactttagcccagatctcatctgatgccaactatgagcaagat
ttgaaactcagcgtttctatttttaccgagctcatgaactcccccgtccgacctccgata
atgaactgggcacatcgcattcatgatctttgccaacccgccttcaatctcctcacccaa
gagcctcttcttgatgaccaagagccgatgtttgcagaacatgtgattcgtctcttcatg
agtttagcgcttgatgatcgtctggcagagtacatggcctccgagggactgatacccgtt
ctcctcaacatatcgctcactccgagggcgtctgaaggactgatcgaacctgtcgcatcc
aatcgacccttcgagagaagtccaactcatcgcctgtggtgttccatccttgctctcgtt
acctcccttgccaacacactttgctacagcgaaacctttgtgctggacgaaatcagttct
tttgcccgactctattcccctcaattactcaaagccatcagtgtcatctcgccaccggat
cacactttgcgcggatcgtccgagatgaacctgactcttgccggtctagaagaggcagag
cttgtgacaaacctcctggtcgttgtctcttcaaaacccgtcggccgctccttactcagc
ttgcctgaaaactatcgccaagccatgctgactgcacttcaaactttagctcattgtctc
aaccatcccaattccacctcgaaatggctagagaatgatgtgacctggaagagtagtagc
aggctaatgagtcagacgttgggcaagaccggtcaagtcgtcgttgataacggccaaccc
ttgcctactcatgtccaagaagctttgttgcacatgttacaagtttctcggaatattctt
cacaccctggtttctcacactcgagctctcagtgttcttacgcgagacgttgcagaatgg
gcagtcgaatatgcaatgattaatcctactagaagtattgtcgttggcgatacagctacc
atcggaacgctgtttgaacttgctgaaacaagtcttgacatctaccgattggcttctact
cggaattccgccccccctaccacatcctccgacctttcagactcggtcaatgtatctgat
gcttcagcagtcgtgctggagttatcattactattggcatcgacacaactggctctatgg
ctctattccaccgccaaccccgagagtagtgtagtcggcagtcttacatatcccagttcc
cacgccatccataaagacagtgaaatgagcgctcaagctccaacatcgcctcggctcaga
agagaaattttgagtgatctggcacctgatttgatgagctcgatcgataaaggattgagt
gtaatcaaactcgtcaattctcgaacaacttaccaacccagatacgccgtcaacccctta
aataggtcgaccatcaagaaaaaaacaatcaaaaaaccgtttcaattgagctattcaagc
actcaatcaagtcctcccagcccttcactcgaaaatcagtccgctcttatagtcaatacc
cccgacaatcatcagcaaactgaagatctcttgtccgccttaaaacgtttcgccgaacgg
tatttttctgaatga
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integrated database retrieval system
