Puccinia triticina (wheat leaf rust): PtA15_9A46
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Entry
PtA15_9A46 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PtA15_9A46
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_9A46
Enzymes [BR:
ptrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PtA15_9A46
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PtA15_9A46
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
nSTAND_NTPase5
MMR_HSR1
FtsK_SpoIIIE
Caerin_1
PduV-EutP
AAA_16
AAA_22
TniB
nSTAND3
ATP_bind_1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
77813565
NCBI-ProteinID:
XP_053023477
LinkDB
All DBs
Position
9A:join(575529..575712,575829..576151,576227..576626,576731..576837,576928..577081,577154..577367,577456..577564)
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AA seq
496 aa
AA seq
DB search
MTQSSSLRPFSLPALHEYRFELDPGESITIRLVSGTAEISGFELTSGQEYTFGDEIRSAI
FSKASTEYVAEESTVPAYMALHLALERARLGSVAPKHFVPHVEPPPRLQHLSDGQEPDEE
KHGPHVMVIGSLASGKSTLIKSLANWAVKSGRTKVEGPGLLLVNLNPNDGAWTVPGTFSV
APLNVSIPTTTPVLPFGSTPTTGPPVLLPLPALDPNQPSTPNPALFAPPLNALSFFYGHT
QFSRNIGLAEVLIKEVGTALETRIEKSGETALWRGGLLIDTPAEFSEKAKGGLVKSVVRA
LGVNILVVIGNEKLHLEISKLMSTNKTVQVVRVPKNGGATDLDITYRRRLESNQIRSYFY
GGPALSQGQLSPFTIVVKFEDLTIYRIGDEAIVPSSALPIGATRSVKPTTLTKVDPENPR
SMSNILNLVLSIPQADWDGADPESDAAFEACSGPSLGFIHLSAIDVKNKKYTILSPLPGR
LPRKTAIGGSLEWMDS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatcatcatcccttcgtccattcagcctacccgccctccacgaatacagattc
gaacttgatccaggggagtcgatcaccatcagattggtctcaggcacggctgaaatatcc
gggttcgagttaactagcggtcaagaatatacctttggcgacgagatccggtctgccatc
tttagcaaggcctcgacggaatacgttgcagaggaatcgacggtaccggcgtacatggct
ctccacctcgcacttgaacgggccaggctgggatcggtggcgccgaagcatttcgttcct
cacgtcgaaccgcctccgaggctgcagcatttatctgatgggcaggagccggatgaggaa
aaacacggcccacatgtgatggtcatcggctcacttgccagtggcaaatctacgcttatc
aaaagccttgctaactgggccgtcaagagtggtcgaacaaaagtcgaaggtcctggtttg
cttctggttaacctgaatccaaacgatggcgcgtggacggttccagggacattctcagtc
gcgccacttaatgtatctattcccacgaccacgccagttctgccgttcgggtccacgccg
acaacaggcccaccagtgctcctaccccttccagccctcgatcctaaccagccctcgaca
ccgaacccggcactgtttgcaccccctctcaacgcgctttcttttttctatggccataca
caattcagccggaatattggcctagctgaagtcctgatcaaggaggtcggaaccgctttg
gaaacaaggatcgaaaagagcggcgagactgctctttggagaggtgggctcttgatagat
acccctgctgaattcagcgagaaagccaagggcgggctggtcaaatcggtggtgcgagcc
ttgggtgtgaatatactggttgtcatagggaacgagaaactgcatctggaaatcagcaag
ctgatgtcaaccaataaaacagttcaggtagtccgagtacccaagaatggaggagcgact
gatctagacattacttatcgaaggcgtctagagtctaaccaaatccggtcttatttctat
ggtggtccggctttatcccaggggcaactttccccattcacgattgttgtcaaatttgaa
gacttgacgatctatcgaattggtgatgaggccatcgttccctcatcagccctgccgatt
ggtgcgacccgctcggtcaaaccaactacgctaaccaaagttgacccagagaatcctcgg
tcgatgtcgaacatcttgaacctggtcctatcaatccctcaagccgactgggatggggca
gatccggagtcggatgctgcatttgaagcttgtagtggaccctcactcggatttattcat
ctttcggcaattgatgtcaagaataaaaagtataccatcctgtcacctctacctggccgg
ttaccacgcaagacagctattggcggatcacttgaatggatggattcatga
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