Polynucleobacter tropicus: DCO17_00465
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Entry
DCO17_00465 CDS
T08318
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp00300
Lysine biosynthesis
ptrp00470
D-Amino acid metabolism
ptrp01100
Metabolic pathways
ptrp01110
Biosynthesis of secondary metabolites
ptrp01120
Microbial metabolism in diverse environments
ptrp01230
Biosynthesis of amino acids
Module
ptrp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCO17_00465 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DCO17_00465 (lysA)
Enzymes [BR:
ptrp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DCO17_00465 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKM63832
UniProt:
A0A6M9PVD0
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All DBs
Position
complement(76707..78005)
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AA seq
432 aa
AA seq
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MTSNTLSLPRLSGFTERNGAWYAEDIALADLAKEFGTPLYVYSKKALTEAYQAYDKACID
SKGKRRARVHYAMKANSNLAVINCFKELGAGFDLVSGGELARALAIGADPKSLVFAGVGK
SATEIATALKAGVKCINVESIAELHKINRVATELGLRAPISLRVNPDVDAQTHPYISTGL
KGNKFGIAYHEVLKTYREASLLSQIDVVGIDCHIGSQITTTAPYLDALDKVLDLVEQLKK
EGIVIHHLDLGGGLGIAYSDETPPDITDFTNTLLNRVSERGFGHLDVVLEPGRSLVGNAG
VLLTTVEYLKPGAEKNFCIVDAAMTELMRPALYEAHHGIVPVQAKRTKSLTYDIVGPVCE
SGDWLGRDRSLAVEEGDLLAILSAGAYGFVMASNYNTRPKPAEIMVDGKNAYVIRAREST
QDLFASESILPK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaacacactttcactccctcgcttatctggttttaccgagcgtaatggcgct
tggtatgccgaagatattgctttagcagatttggcaaaagaatttggtacgccgctatat
gtatatagcaaaaaggcgctgaccgaagcttatcaagcctatgacaaggcctgcattgat
tcaaagggtaagcgtcgtgcgcgagttcattacgccatgaaagccaatagtaatttggca
gttattaactgcttcaaagagctaggcgctggctttgatttagtgagcggtggcgagttg
gcgcgtgcgctggccattggggctgatcctaaaagccttgtatttgcaggcgttggtaaa
tctgcaacggaaattgctactgcactcaaagcaggtgtgaagtgcatcaatgttgaatcg
attgcagagctacacaaaatcaatcgtgttgctactgagcttggattgcgcgcgccaatt
tctcttcgagtaaatccagatgtggacgcgcaaacgcacccttacatttcaacaggatta
aaaggaaataaatttggcatcgcgtatcacgaagttttaaaaacgtatcgtgaagcatca
ctactttctcaaattgatgtcgttggcattgattgtcatatcggctcgcaaattactaca
accgcgccctatttagatgcactagataaggtgttggatctagttgagcagctcaaaaaa
gaaggtattgtgattcaccatttggatttgggtggtggactcggaatcgcctacagcgat
gaaactcctccagatatcaccgacttcaccaacaccctcttgaaccgtgtatcagagcgt
ggctttgggcatttggatgttgttttggagccaggaagatcccttgtaggtaacgctggt
gtcctgttaacaaccgtggaatacctcaaaccaggagcagaaaagaacttctgcattgtg
gatgcggccatgactgagttgatgcggccagccctatacgaagcgcatcatggcatcgtt
cctgttcaagcaaaacgaacaaagagccttacctacgatatcgtcggtcccgtttgcgaa
tctggggactggcttggaagagatcgttctcttgcggttgaggagggcgatctattggca
attctttcagcaggagcttatgggtttgtgatggcttcaaactacaacacacgccccaag
cctgcagagattatggtggatggcaagaatgcttatgtcattcgcgcccgtgaaagtaca
caagatctttttgcaagcgaaagtatcttgcctaaataa
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