KEGG   Portunus trituberculatus (swimming crab): 123503534
Entry
123503534         CDS       T07853                                 
Name
(RefSeq) DNA repair endonuclease XPF-like isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03420  Nucleotide excision repair
ptru03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    123503534
   03460 Fanconi anemia pathway
    123503534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptru03032]
    123503534
   03400 DNA repair and recombination proteins [BR:ptru03400]
    123503534
DNA replication proteins [BR:ptru03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    123503534
DNA repair and recombination proteins [BR:ptru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123503534
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 123503534
NCBI-ProteinID: XP_045109309
LinkDB
Position
14:complement(4377024..4809998)
AA seq 919 aa
MLEYENQMLLDLLHEDGLLVTAKGLGIERILVSLITTFNDAGNLVLVMGTTPREEEYLLA
QLESHHLTPPPCCITADYPTSERTQVYYNGGVLFVTTRILVMDLLMERIPVEMISGIIVW
KAHRILESCQEAFALRLYRQKNKTGFVKALSSSPLSFTAGFCHVERIMRNLFVKKLYLWP
RFHVDVNTCLEKFHPEVVELHLSMTPAMKEIQMSLLDLITATVQELRRSNSTIDTEEFTP
ENAISKSFDKILKIQLDPIWHQLSPRTRTLVADLKVLKTVLGYLTQYDCVTFYNLVNSLR
TTEEALKSSGWMLLSSADSLFLNSKHRVFGTVNNPKVKNTKEALGACSTSKDLNGLCLEV
NPKWVALSEILDEIQKEVNESKHFEKCLVVTQDDRTSQQLREYLVHGSQVVLQRIFYKTV
GQKLGFCPPDNIANDTVKKNIAGRKQKYQKRDMKKTDHPQRQQKVQSQDGGKKIKKQKLT
ESEMNKEEMTLTQLTKQYNFVSHSDSDDLASDKEDDEEGRLPERRFLSPLTLVQSVKTNN
DPFKMTRLLEEVQPKYIIMYDSDLSFIRQLEVWQARHVERVRVYLLLYKGTTEEQIYLTN
VKREKDAFEYLIKEKVSMVIPEYNDGKTGDHPDLIRDSRKATEILADEKTDTRKGGQTEA
ESKPQQRIIVDMREFRSELPSLIHKRGIDIDPVTIEVGDYILSPEICVERKSLSDLIGSL
NSGRLYNQSQAMTRYYKRPVLLIEFDQNKPFYLQGRYFLSSDGSSSSKDIAAKLQLLTIH
FPHLKLLWCPSPYASAEIFQMLKADREEPAVSQAEAVTAETNPDVISERYNPQVKDFVSK
LPGINTKNMYSLLNKIVSLSELLILSKEQLTEVLGSSTNAETLHNSIHQCIKPPDQLQDT
KRGGKFTKKGRRRFQTRLT
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgctggaatatgagaaccagatgttgctggacctgcttcatgaagatggcctcttagtg
acagctaaaggattaggaattgaaaggattttagtgagtttgataaccacttttaatgat
gcgggcaacttggttctggtgatgggaacaacaccacgtgaggaagagtatctgctggca
caactggaaagtcaccatctcactcctccaccatgctgcattactgctgactatccaact
agtgagaggacacaagtgtactataatggaggtgtcttattcgtgaccacacggatcctt
gtgatggacttgttgatggagcgcatcccagttgaaatgatttcaggaataattgtttgg
aaggcccacagaatccttgaatcatgtcaagaagcctttgcactgagactgtatcggcaa
aagaataagactgggtttgtgaaagcactaagcagcagccctctgtccttcacagcagga
ttctgccatgtggaaagaattatgcgtaatctctttgtcaaaaagctctacttgtggcca
cgatttcatgttgatgtaaatacctgtttggagaagtttcatcctgaagttgtggaactc
catctttcaatgactcctgcaatgaaagaaattcaaatgtctctgcttgaccttatcaca
gccactgtacaggaacttcgacgatcaaacagcactattgatacagaagaattcacacca
gaaaatgcaatatctaaatcatttgataaaattttgaaaattcaactagaccccatttgg
catcagttatctccaagaacaaggacacttgtagctgatttgaaagtattgaaaacagtg
ttaggatatttgacacaatatgattgtgtgactttctacaatcttgttaattccctgaga
acaacagaagaggccttgaagagctctggatggatgcttctgagctctgcagactctctt
ttcctgaattcaaaacatagagtgtttggaacagtgaacaacccaaaagttaaaaataca
aaagaagcccttggtgcatgcagtacatcaaaagacctgaatggactttgcttggaagtt
aatcctaagtgggttgcattgtcagaaatccttgatgaaattcagaaggaagtcaatgag
tccaagcattttgaaaaatgccttgtagtgacccaggatgatcgcacctctcagcagctg
agagagtacttggtgcatggttctcaagtggttcttcagcgaattttctacaaaactgtt
ggtcaaaaattgggtttctgtcctcctgacaacattgcaaatgacactgtaaaaaagaac
attgctggcagaaagcagaaatatcaaaagagagatatgaagaaaactgatcaccctcaa
cgtcaacaaaaagttcaatctcaagatggaggaaaaaagataaagaaacagaagctaact
gaatctgaaatgaataaggaagagatgacactcacacaactaacaaagcagtataatttt
gtttcacatagtgacagcgatgaccttgcttcagataaggaagatgatgaagaaggaaga
ctcccagaaagacgatttttgtccccattgacactagtacaatctgtcaagacaaacaat
gaccccttcaagatgactcgacttttagaagaagtgcaacccaagtatatcatcatgtat
gactcagatttgagtttcattcgacagttggaggtatggcaagcacgtcacgtggagcgt
gtgcgggtatatctcctcctctataagggtactacggaggagcagatatacctcaccaac
gtcaagagagagaaagatgcttttgagtatcttattaaggagaaagtgtcaatggttatt
cctgaatacaatgatggaaagactggggatcatccagaccttatccgtgactctcgaaag
gccactgaaattctagctgatgagaaaacagacacaagaaaaggagggcaaactgaggct
gaatcaaaaccacaacagagaatcattgttgatatgagagagtttagaagtgaacttcct
tctttaattcacaaaaggggaatagatattgatcctgtaaccattgaggtaggagactat
atcttatctccagagatttgtgttgagagaaagagcctgagtgacctaattggttccttg
aattctgggcgcctctacaatcagtctcaggccatgacccgctactacaagcgtcctgtc
ttgcttattgaatttgatcaaaataagccattttacttgcagggaagatactttctttca
agtgatggctcctcctcatcaaaggatattgctgccaagctacaactgctaacaatccac
tttcctcacttgaagctgttatggtgcccatcaccttatgccagcgcagaaatttttcaa
atgttgaaggctgacagagaagaaccagcagtatcacaggctgaagctgtcacagctgag
accaacccagatgtcatctctgagcgatataatccacaagtaaaggattttgtctcaaag
cttccagggatcaacactaagaacatgtactcacttctgaacaagattgtaagtttatca
gaattactgatcctctccaaagagcaactgactgaagtgttgggtagcagcaccaatgcc
gaaacactacacaacagcattcatcagtgcataaaacctccagaccaactccaagacact
aaaagaggaggaaagttcactaagaaggggagaagaagatttcagacaaggcttacttga

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