Portunus trituberculatus (swimming crab): 123509797
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Entry
123509797 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123509797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123509797
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
123509797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_11
TPR_17
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_9
ARM_TT21_C
TPR_7
ARM_TT21
ANAPC3
ARM_TT21_2nd
ARM_TT21_N
TPR_15
TPR_Slam
Fis1_TPR_N
TPR_10
Motif
Other DBs
NCBI-GeneID:
123509797
NCBI-ProteinID:
XP_045120284
LinkDB
All DBs
Position
27:15936409..15951871
Genome browser
AA seq
1341 aa
AA seq
DB search
MSEVRNALKEAKKAMKXNDFEAVTKYCKIALKHDRKNYNALLFFGRACQELGKYEDSKKA
LMMATQIDPDSPVAWQGLAVLCEKQPNVSTKDETAIIFTRLIDFVKDDEEKVDSTFRKLA
KLHLDNNDPMAAADVLRTLVDRLTGEKRITEAWRSLAQTLTAVNDLSKEHIPKLQEALEH
SLNDSVLGENETNYQNYLRLLYRTGQRIKLVLAAQNMAKIFPTYLPLEWICRIFVELNAY
PCEEQEFPLSQEETSEYIKRLLSINKTXPWGNLAQGMIYSQEGRLVEAKAHLRLGADNVK
NNLIGWELLRSIQEESSDWPGVETSCRKSLAILSNDSNPTIPGGEDPQAYGTQLRLMQAR
ALVHMGHKNHLKQAVTMLEEFYKTDIDCGLLLVRSRIKLLEFDIASEVLKELEDIFGSSN
QLKFLTATLLHAEGEKQQAKQLLEEIVMEEPGFAEGHLELGQIYFETGEMKHAQICCMRA
GKLNPKLAHAFLYLGHFFRHEDNMDKALKCYEKALSLSPSDDDAGAALSDLYRILGKYEA
NIQLLQRVTREGGRASCGWAWLRLGLHHLALHNHDPAIQAFQCALTINPDDGPGYECLGD
AYLARGAYTAALKVFTYASQLNVTAVYPRYQIAHIKQIVGENLQSVEDFEAVLKWEPMRP
VRVVSLVGLAEALLASARKHQEQFFMSNVKDACTQAIFCLIRAASMKPDCSCIWKLMGDA
CLMLYPVPPSLAPFTLPAKLMNRDIQDLDEVMEVTKLQVLQMGTRCCGLALQGNPEDPLL
WHDLGLSTYLQARVQEGSSEGSKEEATIRDLLSRSIQALKKGLTLDPSSSKMWSSLGIVA
SHKWSGNNALAQHSLIKSCLCQPSAVSWTNLGAFYLSHGETQLAHEAFSQAQNLDPSYVT
CWVGQALVAESIGHSEMFDLFRHTTLLGIHLESCIGYSHHVTDLACDRAKQGQRSTEDTL
KQALPPATDCTVFYTRSVEEDAIGLNMAGLTLEMMGLYKSATRAYEMALSALKQTPDESG
NVLDGVRANLGRTLTAQGQAEEAMVHFSAIKQPDYFTQCGLALASLKAGKFEEAYNGYTA
ALHWLAPDDSQKSHILVALASLQYKFQNSEEAKKLLFQGSQLQGASLRGLLVLAALGLVL
GDAVLTNAALAELTPHQHNKEHLHNIAFLRAAEATAKGNIKEAKCILSRTIHQHPSSAPL
WRALAQHLLTHLPSTKQSRGSSIIYVTTAAAACASAAAKLTQSAGLHKTIAQDAVTSVLA
TIELERAKKSKEGLSLRQAQRTVLMCPGSPEAWAMFLAAQVVSGRAQSKNICQLAHIWSQ
KASPGVSSWLKTLATNMENVA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtaagaaatgcattaaaggaggccaaaaaggccatgaagnataatgacttt
gaagctgtcacaaaatactgtaagattgctttgaagcatgaccgtaaaaactacaatgcc
ttgctgttctttggccgagcatgtcaggagcttggcaagtatgaggactccaagaaggcc
ctcatgatggcaacacagatagacccagacagtcctgtagcctggcaaggattggctgtg
ctctgtgagaagcagccaaatgtttccacaaaagatgagaccgccattatcttcactaga
ctgatagactttgtgaaggatgatgaagaaaaagtggacagcactttccgtaagttggcc
aaactgcacctagataataatgaccccatggctgcagccgacgtccttagaacactggtg
gataggcttacaggagagaagaggataacagaagcatggcgaagtcttgcacagaccctc
acagcagtcaatgatctatccaaagaacatattccaaagctacaagaggctttagaacac
agcctaaatgattctgtgttaggtgagaatgaaaccaactaccagaactacttgcggctt
ctgtaccgcacaggccagcggatcaagctagtgttggcagcccagaacatggccaagatt
tttcccacctatctgcctttggagtggatttgccgcatatttgttgaactgaatgcttac
ccctgtgaagaacaagagtttccacttagccaagaggaaaccagtgagtacataaaaaga
ttgctgagcatcaataaaaccntcccttggggcaatctggcacaaggaatgatttacagc
caagaaggcaggttggtggaggccaaggcacacctgaggcttggagctgacaatgtcaag
aacaatctgatagggtgggagttgttgcgctccatccaggaggaaagtagtgactggcct
ggagtggaaacatcctgtaggaaatctttggccattctctctaatgacagtaaccctaca
atacctggaggagaagaccctcaagcttatggaactcagctaaggttaatgcaagcccgg
gctctggtccacatgggtcacaagaaccatctcaagcaggcagtcactatgctggaggag
ttttacaaaactgatatagactgtgggctgctactggtcagatcaagaataaagcttctt
gagtttgacatagctagtgaagttctgaaggagctggaagacatctttggttcaagtaat
cagctcaagttcctcacagccaccttgctgcatgctgaaggagagaagcagcaggccaag
cagctactagaggagatagtgatggaagagcctggatttgcagagggtcacctggaattg
ggtcagatctactttgagactggggagatgaagcatgctcaaatctgctgcatgagagca
ggaaaattgaaccctaagttggctcatgcctttctgtacctgggccactttttccgccat
gaggataacatggataaggctcttaagtgctatgagaaggctctgtcccttagtccaagt
gatgatgatgctggagcagctttgtcagatctttacaggattttaggaaaatacgaagca
aatatccaacttctacaacgtgtgacaagggaaggcgggcgagcctcgtgtggctgggcc
tggctcaggttggggctgcaccatttggccctccataaccatgatccagctatccaggcc
ttccagtgtgctcttaccatcaacccagatgatggtcctggttatgagtgccttggagat
gcatacttggcccggggtgcttacactgctgctctcaaagtcttcacatatgcctctcaa
ctcaatgttactgctgtctacccacgctaccagattgctcatatcaaacaaattgtggga
gagaacctgcagtctgtggaagactttgaagctgtgctgaaatgggagcccatgagacca
gtccgagtagtgtctctcgtgggattggcagaggccctcctagccagtgctagaaagcac
caggaacagttcttcatgtccaatgtcaaggatgcatgtactcaagctatcttctgcctt
ataagggcagcaagcatgaaaccagactgctcctgcatctggaagctcatgggagatgcc
tgtttaatgttgtacccagtgccaccttcccttgctccatttactcttcctgccaagttg
atgaatagagatatacaagacctggatgaagtgatggaggtaactaagctacaggtccta
cagatgggtaccaggtgctgtggtctggccctacaggggaatccagaagatccattgctg
tggcatgacttgggactgagtacctatctgcaggcaagagtccaggagggcagttcagaa
ggttccaaagaggaagccaccatcagggacctgctgagccgctccatccaggcccttaag
aaaggcctcacccttgacccttctagtagcaaaatgtggagctctcttggcattgtggct
tcccataaatggtctggtaacaatgcattggcacagcattccctcatcaagtcatgcctt
tgccagccatctgctgtatcatggaccaatcttggagctttctacctgagccatggtgag
actcagctggctcatgaggctttctctcaggcacagaacctggatccttcttatgtcacc
tgctgggtgggtcaggcactggtggctgaaagcattggtcactctgaaatgtttgatttg
ttccgccacaccaccttactgggcatccacctggagagctgcataggatattcccaccat
gtaacagaccttgcttgtgatcgcgctaaacagggtcagcggtctacagaggacactcta
aagcaggcattacccccagccactgactgcactgtcttctatacccggtcagtggaggaa
gatgccattggactcaacatggcaggcctaacactggagatgatgggactttataagtca
gcaacaagggcatatgaaatggccctcagtgccttgaagcaaacaccggatgagtcaggg
aatgtgttggatggagtgcgtgccaacttaggtcgcaccctcactgcccagggccaagct
gaagaggccatggtacacttctcagccatcaagcaaccagactactttactcagtgtggt
cttgctttggccagcttaaaagctggaaagtttgaagaggcgtataatgggtacacagct
gccctccactggctggctcctgatgattcccagaaatctcacattcttgttgccttggca
tcattgcaatacaagttccagaattcagaggaagctaaaaagttgctcttccagggatca
caactgcagggggcttcactgcggggtctgctggtcctggcagccttgggcctggtactg
ggggatgctgtgctgactaatgctgcattggctgagctcactccacatcaacacaacaag
gaacacctccacaacatagcatttttgagggctgctgaggcaacagcaaagggtaacata
aaggaagccaaatgtatactgagtcgaacaatccatcagcacccatccagtgcacctcta
tggcgggcattggctcagcaccttctcactcacctacccagtaccaagcaatcaaggggt
tccagtatcatttatgtcaccactgctgctgcagcctgtgcttcagcagcagccaagcta
acacaatcagcagggttgcataaaaccatcgctcaggatgctgttacaagtgtactagcc
actattgagctggagagggccaagaagagtaaggagggattaagtctgcgacaggctcaa
cgtactgtcctcatgtgtccaggctcccctgaggcatgggccatgttccttgcagctcaa
gttgtatcaggacgtgcacaaagcaaaaacatctgtcagctggctcacatatggtctcag
aaggcatctcctggtgtttcctcttggcttaaaactttagcaacaaatatggaaaatgtt
gcataa
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