Portunus trituberculatus (swimming crab): 123516819
Help
Entry
123516819 CDS
T07853
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123516819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123516819
03036 Chromosome and associated proteins [BR:
ptru03036
]
123516819
Spliceosome [BR:
ptru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123516819
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123516819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHDvar_NSD
zf_RING_Vps8
Sporozoite_P67
DUF5720
Motif
Other DBs
NCBI-GeneID:
123516819
NCBI-ProteinID:
XP_045132453
LinkDB
All DBs
Position
41:21853006..21876137
Genome browser
AA seq
495 aa
AA seq
DB search
MHQAPAAGRVNKRCSPTERYTGLLLLYKLVTRRIVIMAVATVESTTLEKIISFINDTGYK
ELMQNSARFNVRIRKDRIYRQPYIDGQTGVAQRHCHLFVSDRHRMPGILQGQVYTYPARR
WKSQRRSYLGSLMQATDADPDEHTITTVENPAAIVTAVEEPVPQPDKVVMPPEQWATYFD
EGPFEDELEDEFESEEDLDDETYSRKGSKRKKTQVGRKPKAAGGLPKKASKKKTSENSSQ
RGGKKKAAPKTPSKIPKNIKKDDDDPSNKPYGCELCGMRYKTRPGLTYHYAHSHKEEKEE
EAKPKAPARPNEQIQANDPIPDYFPGQLQASATPHWGQNSYYQGRSSGRRGGGVGHGSDS
LMPSAGGATVESQSDKGKKKVSASPYCDFCLGDASENRKTGAPESLVSCADCGRSGHPSC
LQFTSNMMKSVVKYRWQCIECKTCTLCGTSENDDQLLFCDDCDRGYHLYCLDPPLSEPPE
GEWSCYLCIQEFHAK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagccccagcggctggcagagtaaacaaaagatgttcccccactgaacgctat
acggggcttttacttttgtataaactagtcacgagaagaatagtgattatggcagttgca
acagttgaaagtacgacgttagagaagataataagtttcataaatgacacaggatacaag
gaactgatgcaaaactctgcaagatttaacgtgaggattcgcaaagacagaatatatcgg
cagccatacatcgatggccaaacaggtgtggcccagagacattgtcacttatttgtgagt
gacagacatcgtatgccaggaattcttcagggacaggtatacacttatccagcacgcaga
tggaagtctcagcgccgctcctaccttggctcactcatgcaggcaactgatgcagaccca
gatgaacacacaatcaccactgtggaaaatccagcagcaatagtcactgctgtagaggaa
cctgtacctcagccggataaagttgtcatgccgcctgaacagtgggcaacatactttgat
gaaggtccatttgaggatgagcttgaagatgaatttgagtccgaggaagatcttgacgat
gagacgtacagcaggaagggatccaagcgaaagaagacacaggttggaaggaaaccaaag
gctgctggtgggttgcctaagaaagccagcaaaaagaagacctcagaaaatagttcccag
cgaggaggcaagaagaaggcggcccccaagactccatctaagattccaaagaatatcaag
aaagatgacgatgaccccagcaacaaaccgtacggttgtgaactctgtgggatgcggtac
aagacgcggcccggcctaacttaccactatgcccactcgcataaggaggagaaggaggag
gaggctaaacctaaagcccctgctagacctaacgagcaaatccaagctaacgaccccatc
ccagactactttcctggccagcttcaggcctcggccaccccacactgggggcagaacagt
tattaccaaggtcgcagttcaggccgacgtgggggtggagtgggccatggaagtgactct
ctgatgccctcggcaggcggagccacagtggagagccagagtgacaaaggcaagaagaaa
gtgtcagcctccccatactgtgacttctgcctaggagatgcttcagagaacaggaagact
ggagctccagagagtctggtttcatgtgctgactgtgggcggtcaggtcaccccagctgc
ctccagttcacctctaacatgatgaaaagtgtggtcaagtaccgatggcagtgcattgaa
tgcaagacttgcactctgtgtggtacttcagagaatgatgaccagctcctgttctgcgat
gattgtgatcgtggctaccacctgtactgcctggatcctccgttgtctgagccgccagaa
ggggagtggtcctgctatttgtgtattcaggagttccatgccaaatga
DBGET
integrated database retrieval system
