Paenibacillus tundrae: V6W81_19970
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Entry
V6W81_19970 CDS
T11276
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6W81_19970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_19970
Enzymes [BR:
ptun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6W81_19970
DNA repair and recombination proteins [BR:
ptun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6W81_19970
Prokaryotic type
V6W81_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WWM59813
LinkDB
All DBs
Position
complement(4447981..4448649)
Genome browser
AA seq
222 aa
AA seq
DB search
MFGNDWDSVLHEEVNAEYFNKIRYALAAEYKTQTVYPSKENLFSALKLTPYHQVKAVIIG
QDPYHGEGQAHGLSFSVMPGVRIPPSLRNIYKEMHADLGLPIPEHGYLVHWAKQGVLLLN
NVLTVREGQPNSHQGLGWQTFTDAVIRELNERSEPMVFMLWGSHAQKKGAFIHRDKHLVL
ESTHPSPLAAHRGFFGSRPFSKANDFLTSKGIEPIDWNIPQN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaatgattgggattcggtgttgcatgaagaagtgaatgccgagtacttcaat
aaaattcgttatgcgctggcggcagagtacaaaactcaaactgtatatccgtctaaggag
aatttgttctcggcgctaaagctcaccccgtatcatcaggtcaaagcagtcattattgga
caagacccttatcatggtgaaggccaagctcacgggttgagtttttcagttatgccaggt
gtacgcattccaccatccttgagaaatatctataaggaaatgcatgctgatctgggtctt
cctatccctgaacatggttatttggttcattgggccaaacagggggtattgctgcttaac
aatgtgttaactgtacgtgaaggtcaacctaactcacatcaaggtctaggctggcagaca
tttacggatgctgttatacgggaattgaacgagcgttcggagcctatggtatttatgctg
tggggcagtcatgcccagaagaagggtgcctttatccatcgagacaagcatctggtgttg
gagtccacacatccaagtccacttgcggctcatcgtggattctttggcagtcgtcccttc
tcgaaggccaatgatttcttgacctccaaaggtattgaaccgatcgactggaatataccg
caaaactag
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