Pasteurella multocida subsp. multocida 3480: NT08PM_2091
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Entry
NT08PM_2091 CDS
T02057
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NT08PM_2091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pul03021
]
NT08PM_2091
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_2091
Enzymes [BR:
pul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NT08PM_2091
Transcription machinery [BR:
pul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NT08PM_2091
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NT08PM_2091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
AFI47186
LinkDB
All DBs
Position
complement(2171067..2175095)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQRDPEGQQGLEAAFRSVFPIV
SNNGNTELQYVSYQLGEPVFDVRECQIRGTTYAAPLRVKLRLVSYDKDAAPGTIKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLYARIDRRRKLPATIILRALNYTTEQILDIFFDKVVFEISNNKLLMT
LVPERLRGETATFDIEANGKVYVERGRRITARHIRALEKDQITQVEVPTEYIVGKVAAKD
YVDLESGEIVCPANMEISLEMLAKLAQAGYKTIETLFTNDLDYGPYISETLRVDPSNDRL
SALVEIYRMMRPGEPPTKEAAEGLFDNLFFSSDRYDLSAVGRMKFNRSLGIDEETGSGIL
SNDDIIGVMKKLIEIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS
LGDLDAVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVNGQVT
EEIEYLSAIEEGKYVIAQANSNLDEELRFTDAFVTCRGEHGESGLYRPDEIHYMDVSTQQ
VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIEKAVAVDSGVTVIAK
RGGMVQYVDASRIVVKVNEDETIPGEAGIDIYNLVKYTRSNQNTCINQIPCVSLGEPIGR
GEVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCV
ARDTKLGSEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKD
LVEELEILEAGLFTRVRSLLIAGGFDAKNLDKLDRTKWLEQSLSDEAQQNQLEQLAEQYE
ELRKEFERKLEVQRGKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKI
NPVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILETHLGLAAKGIGDKINAMIKQQQDVA
KLREYMQKAYDLGHGSQKVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLE
LGGLPTSGQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVGGTHQMDPGTP
ESFNVIMKEIRSLGINIDLDED
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctacacagagaaaaaacgtattcgtaaagacttcggcaaacgtccgcaa
gttttaaatgtaccttatttattaactatccaactcgattctttcgataaattcattcaa
agagatcctgaaggtcagcaaggtttagaagcagcattccgctccgtattcccgattgtc
agcaataacggcaacacagaattacaatatgtaagctatcaattgggtgagcctgtattt
gatgtcagagaatgtcaaatccgtggtaccacttatgctgcgccattacgtgtgaaatta
cgcttagtcagctatgacaaagatgctgcaccgggcacaatcaaagatattaaagaacaa
gaagtttatatgggtgaaatcccattaatgaccgataacggtacctttgtgattaatggt
acagagcgtgttatcgtgtcgcaattacaccgtagcccaggtgtcttctttgattctgac
aaaggtaaaacacattcttcaggtaaagtcttatataacgcaagaattattccttaccgt
ggttcatggttagactttgaattcgatccaaaagataacttatatgcacgtatcgaccgt
cgtcgtaaattaccggcaaccatcattttacgtgcgttaaattacaccaccgaacaaatt
ttagatattttcttcgataaagtggtttttgaaatcagcaataacaaattgttgatgaca
ttagtaccagaaagactccgtggtgaaacggcgactttcgatattgaagcaaacggcaaa
gtgtatgttgaacgtggtcgtcgtattaccgcgcgccatatccgtgctttagaaaaagat
caaatcacgcaagttgaagtcccaacagaatatattgtgggcaaagtggcagcaaaagac
tatgtggatttagagtctggtgaaattgtttgccctgcgaatatggaaatctcattagag
atgttagccaaacttgcgcaagcgggttacaaaaccatcgaaaccctgttcactaacgat
ttagattacggtccttacatttcggaaaccttacgcgttgatccatcaaacgatcgttta
agtgcgctagtggaaatttaccgcatgatgcgtccaggtgagccaccaacaaaagaagcg
gcagaaggcttatttgataacttattcttctcatcagaccgttatgatttatctgcggta
ggtcgtatgaagttcaaccgctctttaggcattgatgaagagacaggtagcggcatttta
agcaacgatgacatcattggtgtgatgaaaaaactgatagagatccgtaacggtcgtggt
gaagtcgatgatatcgaccacttaggtaaccgtcgtattcgttcagtgggtgaaatggca
gaaaaccaattccgtatcggtttagtgcgtgtagaaagagcggtgaaagagcgcttatct
ttaggtgatttagatgcagtgacaccacaagatttaatcaacgccaaaccaatttctgcg
gcagtgaaagaattctttggttcttcacaactttcccagttcatggatcaaaacaacccg
ttatcagaagtaacgcacaaacgtcgtatttctgcattaggtccgggtggtttaacacgt
gaacgtgcaggctttgaggtgcgtgacgttcacgcaacccactatggtcgtgtctgtcca
attgaaacgcctgaaggtccaaacatcggtttgatcaactcattgtctgtttatgcacgt
accaacgactacggtttcttagagaccccatatcgtaaagtggtgaacggtcaagtaaca
gaagagatcgaatatttatcagcgattgaagaaggtaaatatgttatcgctcaggcgaac
tcgaatcttgacgaagaattacgctttaccgatgcgtttgtaacttgtcgtggtgaacac
ggtgaatcgggtttatatcgtccagatgaaattcactatatggacgtttctacacaacaa
gtggtatctgtggcggcagcgttaattccattccttgagcacgacgatgcgaaccgtgcg
ttaatgggtgcaaacatgcaacgtcaagcggtaccaacattacgtgcggataaaccatta
gtcggtactggtattgagaaagcggtagcggtggactctggtgtaacggtaatcgcaaaa
cgtggcggtatggtgcaatacgttgatgcgtcacgtatcgtggtgaaagtgaacgaagat
gaaaccatcccaggtgaagcgggtattgatatttataacttggtgaaatacacccgttca
aaccaaaatacctgtatcaaccaaattccttgcgtgtctttaggtgagcctatcggccgt
ggtgaagtattagctgatggtccttcaacagacttaggtgaattagcgcttggtcaaaac
atgcgcgtagcattcatgccttggaatggttataactttgaagactcgatgttagtgtct
gaacgtgtagtacaagaagatcgtttcacgactattcacattcaagaactttcttgtgtc
gcacgtgataccaaattaggttcagaagaaatcactgcggatattccaaacgtcggtgaa
gccgcattaagcaaactggatgagtccggtatcgtttacatcggtgcggaagtaaaaggt
ggtgatattcttgtgggtaaagtaacaccaaaaggtgaaacccaattaaccccagaagaa
aaattattacgcgcaatcttcggtgaaaaagcctctgatgtgaaagattcttcattacgt
gtaccaaacagtgtttctggtaccgttatcgacgtgcaagtctttactcgtgatggtgtt
gaaaaagacaaacgtgcgcttgaaattgaagaaatgcaattaaaacaagcgaaaaaagac
cttgtggaagaattagaaatccttgaggccggcttgtttacgcgtgttcgtagccttctg
attgcaggtggtttcgacgcgaaaaacttagataaattagaccgtactaaatggttagaa
caatcattaagcgatgaagcacaacaaaaccaattagagcaacttgctgaacaatacgaa
gaattacgtaaagaatttgaacgtaagttggaagtacaacgtggcaagatcatccaaggt
gatgatttagcaccgggcgtattgaaagtggtgaaagtgtatcttgcagtgaaacgtcag
atccaaccaggtgataaaatggcgggtcgccacggtaacaaaggggttatctcaaaaatc
aaccctgtggaagacatgccatacgatgaaaacggtcaaccagtggatatcgtgttgaac
ccgctaggtgttccatcacgtatgaacattggtcagatcttagaaacacacttaggttta
gccgcgaaagggattggtgacaagatcaatgcgatgatcaaacaacaacaagacgtggcg
aaattgcgtgaatacatgcaaaaagcctacgacttgggtcacggttcacaaaaagtggat
ttaagcactttctctgatgaagaagtgatgcgtttagcacaaaacttacgtaaaggttta
ccgcttgccaccccagtatttgacggtgcgcacgaaagcgaaatcaaaggcttattagaa
ttaggtggcttgccaacgtctggtcaaattaccttattcgacggccgtactggtgagaag
tttgagcgtccagttaccgtaggttacatgtatatgctcaaattgaaccacttagttgac
gataaaatgcatgcgcgttcaaccggttcttacagcttggtaacacaacaaccattgggt
ggtaaagcccaattcggtggtcagcgtttcggtgagatggaggtgtgggcacttgaagca
tacggtgcagcttatactttacaagaaatgttgacggtgaaatctgatgacgtgaacggt
cgtacgaagatgtataaaaatatcgtcggtggcacacatcaaatggatccaggcacacca
gaatctttcaacgtcattatgaaagaaattcgctcgcttggtatcaatattgatttagat
gaagattaa
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integrated database retrieval system
