KEGG   Pusillimonas sp. T7-7: PT7_1395
Entry
PT7_1395          CDS       T01486                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
put  Pusillimonas sp. T7-7
Pathway
put02024  Quorum sensing
put03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:put00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PT7_1395
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PT7_1395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:put03019]
    PT7_1395
   03036 Chromosome and associated proteins [BR:put03036]
    PT7_1395
Messenger RNA biogenesis [BR:put03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PT7_1395
Chromosome and associated proteins [BR:put03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PT7_1395
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AEC19935
LinkDB
Position
complement(1507834..1508070)
AA seq 78 aa
MSNKGQTLQDPFLNALRKDHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFQVDEPSE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaacactacaagatccatttctaaacgcccttcgcaaggaccac
gtacctgtatcgatctacctggttaacggaatcaagctgcaagggcaggtcgagtctttc
gaccagtatgtcgtactgctgcgcaataccgttacgcaaatggtctacaagcacgctatt
tccaccgtcgtaccggcccgcccagtcaacttccaagtggatgagccttctgaataa

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