Pantoea vagans C9-1: Pvag_0216
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Entry
Pvag_0216 CDS
T01326
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pvag_0216 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pva03032
]
Pvag_0216 (rnhB)
Enzymes [BR:
pva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Pvag_0216 (rnhB)
DNA replication proteins [BR:
pva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
Pvag_0216 (rnhB)
Elongation factors (archaeal)
Pvag_0216 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
ADO08436
UniProt:
E1SDZ1
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All DBs
Position
241985..242611
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AA seq
208 aa
AA seq
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MPDFIYPVARLIAGVDEVGRGPLVGAVVTAAVILDPANPITGLADSKKLSEKRRLSLYDE
IKEKALAWSLGRAEPEEIDQLNILHATMLAMQRAVAGLSIQPDYVLIDGNRCPALPMPSQ
AVVKGDSLVAEISAASIIAKVSRDREMAELDLLFPQYGFAQHKGYPTALHMEKLTQYGAT
PHHRRSFAPVRNALLDAEVLAARQILTL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattttatctatcctgtcgccagactgattgccggtgtggacgaagtggggcgt
ggtccgctggtcggcgcggtggtcactgctgccgtcatcctcgacccggctaatccgatt
accggtttggctgactccaagaaattgtcggaaaagcgccgcctgtcattgtatgacgaa
atcaaagagaaggcgctggcctggagtctgggacgtgcagagccggaagagattgatcag
ctcaacattctgcacgccactatgctggcgatgcagcgcgccgttgctggcctgagtatt
cagcccgactatgtgctgattgatggtaatcgttgtccggcgttgccaatgccttcacag
gccgtggtgaaaggggatagcctggtggccgaaatcagtgcagcctccatcatcgccaaa
gtgtcgcgcgatcgtgaaatggccgagctggatctgctgttcccgcagtatggttttgcg
cagcacaaaggttatccgacggcgctgcatatggaaaaactgacgcagtatggcgccacg
ccgcaccaccgtcgcagttttgcgcctgtacgcaacgcgctgctcgacgctgaagtactg
gctgcccgccagatccttacgctttaa
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