Pseudoalteromonas viridis: J5X90_11355
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Entry
J5X90_11355 CDS
T07232
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00300
Lysine biosynthesis
pvb01100
Metabolic pathways
pvb01120
Microbial metabolism in diverse environments
pvb01230
Biosynthesis of amino acids
Module
pvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J5X90_11355 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvb01002
]
J5X90_11355 (dapE)
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J5X90_11355 (dapE)
Peptidases and inhibitors [BR:
pvb01002
]
Metallo peptidases
Family M20
J5X90_11355 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
QTL34170
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All DBs
Position
1:2594532..2595710
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AA seq
392 aa
AA seq
DB search
MPSPAIKPSVKHNTSSNTVKTLRRLINAPSVTPDDAGTIDYLAERLATLGFEYTHLDCNG
VRNLVAWREFGPGPVMAFAGHVDVVPANPQGWVAHPFAAAVIDDVIYGRGAADMKGGVAA
MLSATEHLCERAQQCQGTLFWLITSDEEGEAEYGSKIMAEYLAQQAIVLDACLVGEPTSH
QQVGDTIKNGRRGAISGRIQIRGKAGHVAYPEQTINAAHIAGELVNELANISWWKDVLGS
QTSLQVTGLTVPDIVDNLVPASCEITFNVRYSHAYKSQEIYQIVAQALAPWHDNVSVQWE
RPCESYYTGGRESACFLNLVEQAILRVRGQFPALSTAGGTSDGRFFASCETQVIECGVKN
DSIHQVNEHVSVADLHAIEEIYRAILCDYFVA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccctgcaataaaaccttcggtcaaacacaataccagcagcaatacggtaaaa
acgctgcgacgcttaatcaacgcgccctctgtaacaccggatgatgccggtaccattgat
tatctggctgaacgtctggcgacacttggctttgaatacacgcatctcgattgtaacggt
gtgcgcaatctggttgcctggcgtgagtttggccccgggcctgtgatggcttttgcgggt
catgttgacgtggttcctgcgaacccacagggctgggtggcacatccctttgccgctgcc
gtgatagatgacgtgatttatgggcgaggcgcggccgatatgaaagggggcgttgccgct
atgttgagtgcaaccgagcacttgtgtgagcgggcgcagcagtgccagggcaccttattc
tggcttattacctctgatgaagagggggaagctgagtatggctcaaaaatcatggccgag
tatctggcacaacaggcgattgtgcttgacgcctgtctggttggtgaacccacttcacat
cagcaagtcggcgacactattaaaaatggtcgtcgtggtgcgatttccgggcggatacag
atccgtggtaaggctgggcatgtcgcttaccctgagcaaaccatcaatgcggcgcatatt
gccggtgagctggtgaatgagctggccaatatcagctggtggaaagatgtgctggggtcg
caaaccagtttgcaggtaaccggcctgacggtgcctgatatcgttgacaacctggtgccg
gcaagctgtgaaattacctttaatgtgcgttacagccatgcctataaaagtcaggaaatc
tatcagatagtggcacaggctttggcgccctggcacgataacgtcagtgtgcagtgggag
cgtccctgtgagtcctactatacgggcggacgtgagtcggcgtgttttctcaatttggtt
gagcaggccattttgcgtgtgcgaggacagtttccggcactgagcaccgccgggggcaca
tcggatggtcgcttttttgcctcctgtgagacacaggtgattgaatgtggcgtaaagaac
gactccattcatcaggtgaatgaacacgtgtcggtggcagatctccacgccattgaggag
atctaccgcgcgattttatgcgactactttgttgcttga
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