Pseudoalteromonas viridis: J5X90_18560
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Entry
J5X90_18560 CDS
T07232
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00550
Peptidoglycan biosynthesis
pvb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5X90_18560
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvb01002
]
J5X90_18560
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvb01011
]
J5X90_18560
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J5X90_18560
Peptidases and inhibitors [BR:
pvb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
J5X90_18560
Peptidoglycan biosynthesis and degradation proteins [BR:
pvb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
J5X90_18560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
DUF6317
Beta-lactamase
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
QTL35485
LinkDB
All DBs
Position
1:4224937..4226100
Genome browser
AA seq
387 aa
AA seq
DB search
MTVFKPKFIKHLVGAVCSFTLFSASAQILPSPPQIGAKGYFLVDFTTGKVIAEGNPDTKL
APASLTKMMTSYVIGTELLAGNISNDDMVTISEKAWAKNFPESSKMFIEVGKQVSVKDLN
YGVIIQSGNDACVAMAEHIAGSESAFTDLMNAHAEKLGMSNSHFANSHGLDSTEQYTTPR
DMATLGAALIRDVPDEYAIYKEKSFTFNGIKQYNRNSLLWDASLDVDGIKTGHTSEAGYS
LVTSATKGDMRLIAVVMGTASERARKVESKKLLNYGFRFFETITPYKAGDSFADQRIWMG
NKETVSLGIAEDTPITIPRGQRKNLKAHFELDKTLEAPLAKGSKVGTLFLQLEGEDIAQY
PLVTLEEIEEGSFFSKIYDYLRLQIMQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttcaaacctaaatttattaaacacttagtgggcgccgtgtgttcgttcacc
ctgttttcggccagtgcgcagatcttgccttcaccacctcaaattggtgccaagggctat
ttcctggtggattttacaaccggtaaagtcattgccgagggcaacccagacactaagctg
gccccggcgagcttaaccaaaatgatgaccagttatgtgattggtaccgagctgctggct
gggaacatttctaacgacgacatggtcaccatcagtgaaaaggcctgggcgaagaacttc
ccggaatcttccaaaatgtttatcgaagtgggtaagcaggtcagtgttaaagacctcaac
tacggtgtgattatccagtcgggtaacgacgcctgtgtcgccatggcagagcatatcgca
ggcagtgaaagcgcctttaccgatctgatgaatgcccatgctgagaaactgggcatgagc
aactcgcactttgctaacagccacggtctggacagcaccgagcagtacaccacaccaaga
gatatggcgaccctgggtgcagcgcttattcgtgatgtaccggacgagtatgccatctac
aaagagaagtcgttcacctttaatggcattaagcagtacaaccgtaactccctgctgtgg
gatgccagcctggacgtcgatggcattaaaaccggtcacacctcagaagccggctacagc
ctggtaacttcagccaccaaaggcgacatgcgtctgatagccgtggtcatgggcacagcc
agtgaacgtgctcgtaaagtagagagtaaaaagctcctgaactatggctttcgcttcttc
gaaaccattaccccttataaagcgggcgacagctttgccgatcaacggatatggatgggt
aataaagagaccgtatcactgggtattgccgaggatacaccgatcaccattccacgtggt
cagcgtaaaaacctgaaggcccacttcgagctggataaaaccctcgaagcaccactggcg
aaaggcagcaaggttggtactttattcttgcaactggaaggcgaagacattgcccagtac
ccgctggtcacgctggaagaaatagaggaaggcagtttcttcagcaagatttacgactac
ttacgtttacagatcatgcaataa
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