Pseudomonas viridiflava: CFBP1590__4026
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Entry
CFBP1590__4026 CDS
T06554
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00541
Biosynthesis of various nucleotide sugars
pvd01100
Metabolic pathways
pvd01250
Biosynthesis of nucleotide sugars
Module
pvd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CFBP1590__4026 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvd01005
]
CFBP1590__4026 (kdsA)
Enzymes [BR:
pvd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CFBP1590__4026 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pvd01005
]
Lipid A
CFBP1590__4026 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
SMS11612
UniProt:
A0A1Y6JS25
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All DBs
Position
I:complement(4470502..4471347)
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AA seq
281 aa
AA seq
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MAQKIIRVGSIEIANDKPMVLFGGMNVLESRDMAMQVCEEYVRVTEKLVIPYVFKASFDK
ANRSSVTSYRGPGLEEGMRIFEEIKRTFNVPLITDVHEPEQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTGAVINIKKAQFLAPQEMKHILTKCEEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPILFDVTHALQMPGGRSDSAGGRRAQVLDLAKAGISQNLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKSLDELVKSFPIVETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaaaatcatccgcgtaggctccatcgagatcgccaacgacaaaccaatggtt
ctgttcggtggcatgaacgtgctggagtcccgcgacatggccatgcaggtctgcgaagaa
tatgtgcgggtcaccgaaaagctcgttattccttacgtgttcaaggccagcttcgacaag
gccaaccgttcctcggtgacttcctaccgtggtcccggactggaagagggcatgcgcatt
ttcgaagagatcaagcgcaccttcaacgtgccgttgatcactgatgtgcatgagcccgag
caggctgctgtcgttgccgaagtgtgcgacatcatccagctgccggctttcctgtctcgc
cagaccgacctggtggtcgcgatggcgaagaccggtgctgtcatcaacatcaagaaggcc
cagtttctcgcgcctcaggaaatgaagcacatcctgaccaagtgcgaagaagccgggaac
gatcagttgatcctgtgcgagcgcggttccagcttcggttacaacaacctggtggtggac
atgctcggcttcggcatcatgaagcagttcgagtacccgatccttttcgacgtgacccac
gcgttgcaaatgccgggtggtcgctccgattccgccggcggtcgccgcgctcaagtgctt
gacctggccaaggccggtatcagccagaatctggccggtctgttcctcgaggcccacccg
gatcctgacaacgccaaatgcgacggtccctgcgcattgcgcctggacaagctggagccc
ttcctggctcagctcaagtcgctggatgaacttgtgaaaagttttccgatcgtagagacc
gcttga
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