Pseudomonas viridiflava: CFBP1590__4147
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Entry
CFBP1590__4147 CDS
T06554
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFBP1590__4147 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590__4147 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__4147 (hisS)
Enzymes [BR:
pvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CFBP1590__4147 (hisS)
Amino acid related enzymes [BR:
pvd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFBP1590__4147 (hisS)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CFBP1590__4147 (hisS)
Prokaryotic type
CFBP1590__4147 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
SMS11733
UniProt:
A0A1Y6JTV2
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All DBs
Position
I:complement(4606657..4607946)
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AA seq
429 aa
AA seq
DB search
MSKSLQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTDLFKRSIGEVT
DIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQK
GRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRE
ALVEFLSARLDQLDEDSQRRLKTNPLRVLDTKHPETQAVLVDAPKLADYLDEESRVHFEG
LKARLDAAGIPYVINPKLVRGLDYYSKTVFEWVTDQLGAQGTVCAGGRYDGLVEQMGGKP
TAGVGFAMGIERLVLLLETLEQIPEEISRQVDVYLCAFGEAAELAGLTLAEQVRDRLPNL
RLQVNAGAGSFKSQFKKADKSGALYALILGDEELGQKIIGVKPLRGQGEQQNIAWDALSE
HLASCVVQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagtctctgcaagccattcgtggcatgaacgacatcctgcctgagcagacgccg
ctgtggcgtcacttcgaaggcactgtctcgcgcctgctcgataactatggttatcgccag
attcgcatgcctatcgtcgaatttaccgacctgttcaagcgctcgatcggcgaagtcacc
gatatcgtcgagaaagagatgtacacctttgccgatcgcaacggtgactcgctgaccctg
cgccctgaaggcacggcggcgtgcgtgcgcgcagtgctcgagcatggcatcacgggtggc
ggccaggtgcagaagctgtggtacatcggcccgatgttccgtcacgagcgtccgcagaaa
ggccggtatcgccagtttcaccagatcggcgtggaagtcttcaaccttgacggtccggac
atcgatgccgaactgatcgtcatgacctggcgcctgtggggcatgctgggtattcgcaac
gcggtcaagctcgagctcaacagcctgggcaccagcgaagcccgtgcacgctatcgcgag
gcgctggtggagtttctgtcggcgcgtctcgaccaactggatgaagacagccagcgccgt
ctgaaaaccaatccgctgcgcgtgctcgacaccaagcatcccgagactcaggccgtgttg
gtggatgcgccgaagctggccgattatctcgatgaagaatcccgcgttcacttcgaaggc
ctgaaagcccgtctggacgctgccggtattccttacgtgatcaatcccaagctggtgcgc
gggctggattactacagcaagaccgttttcgaatgggttaccgatcaactgggtgctcag
ggcactgtctgtgcgggcggtcgttacgacggcctggtcgagcagatgggcggcaagccc
acagcgggcgttggctttgcaatgggcatcgagcgtctggtgctgctgctggagaccctg
gagcagatcccggaagagatctcccgtcaggtcgacgtgtacctttgcgcgttcggtgaa
gctgccgagcttgccggtctgacgctcgccgaacaggtgcgcgaccgtctgccgaacctg
cgtctgcaggtcaatgccggtgccggtagcttcaagagtcagttcaagaaagccgacaag
agcggcgcgctgtatgctctgatcctcggcgacgaagagctcggccagaagatcattggc
gtcaaacccctgcgtggtcagggtgaacaacaaaatattgcttgggacgctctgtcagag
cacctggcctcctgcgtcgtgcagggttga
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