KEGG   Panicum virgatum (switchgrass): 120644640
Entry
120644640         CDS       T07260                                 
Name
(RefSeq) adagio-like protein 3 isoform X1
  KO
K12116  flavin-binding kelch repeat F-box protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120644640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120644640
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120644640
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_4 Kelch_3 Beta-prop_ATRN-LZTR1 Kelch_2 Kelch_5 PAS_9 Kelch_1 Kelch_6 PAS_3 PAS NANM F-box-like F-box PAS_4 p6 PAS_8
Other DBs
NCBI-GeneID: 120644640
NCBI-ProteinID: XP_039777253
LinkDB
Position
8K:complement(39920109..39930618)
AA seq 607 aa
MFDDGAAGDRGAVAVKRMRLWEEGWAWGPPAPAAGVGEQRAAAIVVADAAEADFPVIYVN
AAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMIVSEIRRCLNEGIEFQGELLN
FRKDGAPLYNRLRLIPMHGDDGSVTHVIGIQLFSEANIDLSNISYPVYKQQSNHRPSIQD
LNSASHEHTPKIQSSDYCGILQLSDEVLAHNILSRLSPRDVASIGSVCTRMHELTKNDHL
RKMVCQNAWGRDVTVRLEMSTKMLRWGRLARELTTLEAASWRKFTVGGRVEPSRCNFSAC
AVGNRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKVSASPPGRWGHTLSWLNGSWLV
VFGGCGQQGLLNDVFVLDLDAQQPTWREVASEGPPLPRSWHSSCTLDGSKLVVSDGCTES
GVLLSDTFLFDLTKEKPAWREIPTSWSPPSRLGHTMSVYGATKLFMYGGLAKSGSLRLRS
SDAYTMDVGEDSPQWRQLATTGFPNVSPPPRLDHVSVSLPCGRIIIFGGSIAGLHSPAQL
FLIDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVMGGHTGEEWILNELHELCLA
SRPDEDE
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgttcgacgacggcgcggcgggggatcgcggcgcggtggcggtgaagcggatgagactg
tgggaggaggggtgggcgtgggggccgccggcgccggcggcgggggtcggggagcagcgg
gccgcggcgatcgtggtggccgacgcggcggaggccgacttccccgtcatctacgtcaac
gccgccttcgaggccgccacggggtaccgcgcccacgaggtgctcgggcgcaactgccgt
ttcctgcaatttcgggatccacgtgcgcaaaggcggcatccccttgttgatcccatgatt
gtttcagagattcggcgatgtctcaatgaggggattgaattccaaggcgagctgctcaat
ttccggaaggatggtgctccactatacaacagattaaggctcattcctatgcatggggat
gatggctctgtgacacatgttattgggatccagctattctctgaggcaaacattgatctc
agcaacatatcatatccagtgtataaacaacagtctaaccacaggcctagcattcaagat
ctgaactcagcttctcatgaacatactccaaaaatccagagttcagactactgtggtatc
ctccaattgtcagacgaagttcttgcacacaacattttatctcgcctgtcgccaagagat
gtcgcatcgattggatcagtctgtaccagaatgcatgaactaaccaagaatgatcacctg
aggaagatggtctgccagaatgcttggggaagagatgtcactgtcaggcttgagatgagc
accaagatgttaagatggggtcgccttgcaagagagctaacaacccttgaggctgcctca
tggagaaagttcactgttggaggacgcgtggagccttcccgttgcaacttcagtgcatgt
gctgttggtaatcgccttgtcctttttggaggggagggagtcaacatgcagcctatggat
gacacgtttgtgcttaacttggaggctgcaaggccagaatggcgccgtgtcaaggtctct
gcctccccacccggccggtgggggcacactctatcatggctgaatgggtcatggctggta
gtatttggaggctgtggacagcaaggtttgctcaacgatgtctttgtccttgatcttgat
gctcagcagcctacatggagggaggttgcgagtgagggtcctccactgccacggtcttgg
cacagctcatgcactttggatggttcaaagctcgttgtttcagatgggtgcactgaatcc
ggagttcttctcagcgacaccttcctctttgacctcacaaaggaaaaaccagcttggagg
gagattcctacatcctggtctccaccatcccgccttggtcacaccatgtctgtctatggt
gcaaccaaactattcatgtatggtggactggcaaagagcggttctctccggctgcgctcc
agtgacgcctacacaatggatgtcggtgaagacagtccccaatggaggcagctggcaaca
actggcttcccaaatgtcagtccaccgccaaggcttgatcatgtctctgtgagcctacca
tgtgggagaatcatcatatttggcggctcgattgctggcctgcactccccagcgcagctg
ttcctgatcgaccctgctgaggagaagccgacatggaggatactgaacgtccctgggcag
ccaccgaagtttgcctggggacacagcacatgtgtagtgggtggcacaagagttctggtc
atgggaggccacaccggggaggagtggatcctgaatgagctccatgagctttgccttgca
agcaggcccgatgaagacgagtga

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