Panicum virgatum (switchgrass): 120647251
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Entry
120647251 CDS
T07260
Name
(RefSeq) phosphoserine aminotransferase 2, chloroplastic-like
KO
K00831
phosphoserine aminotransferase [EC:
2.6.1.52
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00270
Cysteine and methionine metabolism
pvir00750
Vitamin B6 metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
pvir01240
Biosynthesis of cofactors
Module
pvir_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120647251
00270 Cysteine and methionine metabolism
120647251
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
120647251
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120647251
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.52 phosphoserine transaminase
120647251
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class V
120647251
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
120647251
NCBI-ProteinID:
XP_039779904
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Position
9K:complement(66987897..66990155)
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AA seq
535 aa
AA seq
DB search
MELSYPDPTGCQHKLGETSRGLLKVCNLSAVTLLSSSWLQFAGKLNATAPTTTQRATNPF
GIGFASSPIARRRANPRILTPPLPARSYRSRPLSHSAPSNSKPSSPLLSHPPTMAAAATS
TAHSLLLQRPTAPRAPAAAASSLRLPARAAKISCAAVAAPSASSPLTGAGDRGVYNFAAG
PATLPLSVLKRAQAELVDYHGSGMSIMEMSHRGKEFDAAIKKAEADLRALLAVPDTHAVL
FLQGGATTQFAAVPLNLCAGPSDPADFVVSGSWSDKAFKEAKKFSAASAAWSGKDAKYTA
LPPFDDIKQNPEARFLHICSNETIHGVEFKDYPEPRNKSGILVADMSSNFCSKPVDVSRF
GVIYAGAQKNVGPSGVTIAIVRKDLIGNAQPITPVMLDYKTHADNASLYNTPPCFAIYIC
GLVFEDLLAQGGLAEVEKKNAYKAGILYDTIDASSGYYICPLEKSVRSLMNVPFTLAKGP
DFEKQFIAEAAKEGMVQLKGHRSVGGVRASIYNAMPLAGVEKLVAFMKDFQARNP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagctacccagatccaacaggttgccaacacaaacttggagaaaccagcaga
ggtctgcttaaggtttgcaacctgagcgcagtcacgttgctgagctcaagttggttgcaa
tttgccggcaagctcaacgctaccgctcccactacaacccagcgggccaccaaccctttt
ggcatcggcttcgcttcatcgcccatcgctaggcggcgcgccaacccccggattctgaca
cctcctctccccgctcgctcctatagatcccgtcccctttcccattccgcaccgagcaac
tcaaaaccctcctctcctctcctctcccacccacccacgatggccgccgccgccacatcc
actgctcactcactcctcctccagcgccccaccgcgccgagggctcccgccgccgccgct
tcctccctgcgcctcccggcgcgcgccgccaagatctcctgcgcggcggtggcggcgccg
tccgcgtcctcccccctcaccggcgccggggaccggggcgtctacaacttcgcggcgggc
ccggcgacgctcccgctcagcgtcctcaagcgggcgcaggcggagctcgtcgactaccac
ggctccgggatgagcatcatggagatgagccaccgcgggaaggagttcgacgccgccatc
aagaaggccgaggccgacctgcgcgcgctcctcgcggtgcccgacacccacgccgtgctc
ttcctccagggcggcgccaccacgcagttcgccgccgtgccgctcaacctctgcgccggc
ccctccgaccccgccgacttcgtcgtctcggggtcctggagcgacaaggccttcaaggag
gccaagaaattctccgccgcctccgccgcctggtccggcaaggacgccaagtacaccgcc
ctcccgcccttcgacgacatcaagcagaacccggaggccaggttcctccacatctgctcc
aacgagactatccacggcgtcgagttcaaggactacccggagccccgcaacaagtccggc
atcctcgtcgccgacatgtcctccaacttctgctccaagcccgtcgacgtctcccgcttc
ggcgtcatctacgccggcgcgcagaagaacgtcggcccctcgggggtcaccatcgccatc
gtgcgcaaggacctcatcggcaacgcgcagcccatcaccccagtcatgcttgactacaag
acgcacgccgacaacgcctcgctctacaacaccccgccctgcttcgccatctacatctgt
ggcctcgtcttcgaggacctgctcgcgcagggcggccttgcggaggtcgagaagaagaac
gcctacaaggctggcatcctctacgacaccattgacgccagcagcgggtactacatctgc
cccttggagaagtcagtgcggtcgctgatgaacgtgcccttcactctggccaaggggccg
gactttgagaagcaattcatcgccgaggcggccaaggagggcatggtgcagctcaagggg
cacaggtcagtcggcggagtgcgcgcatccatctacaatgccatgccgctggctggcgtg
gagaagcttgtcgcgttcatgaaggatttccaagctaggaacccttga
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