Panicum virgatum (switchgrass): 120647777
Help
Entry
120647777 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120647777
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120647777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120647777
NCBI-ProteinID:
XP_039780554
LinkDB
All DBs
Position
9K:17626369..17629452
Genome browser
AA seq
359 aa
AA seq
DB search
MQRSVTRILVLLSEPARIAGAARVYVLGLIPQIFAYAANFPIQKFLQAQSIVLPSACISA
ATLAAHLALSYLAVYRLGLGLLGASLVLSLSWWAVVAGQFAYIAASPRCRRTWTGFSCRA
FSGLPEFLRLSAASAVMLCPETWYTQITVLIAGLLKDPEIALDSLAVCMSLSGWSFMVSV
GFNAAASVRVSNELGAGHARAASFSVEVVTAASVAVACAIAAAVMCLRDSIGYVFTKGDD
VARAASAMAPLLAVTIVLDGIQPVLSGVAVGCGWQAFVAYVNIACYYGIGIPLGCVLGFH
FDLGAMGIWGGMVGGLVAQTLTLIWITLRTDWDKEVQQARMRLNKWEREDKKTPLLAED
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttctgtcacacggatcctcgtcctcctcagcgagccggcgcggatcgccggc
gccgcccgggtctacgtcctcggcctcatcccgcagatcttcgcgtacgccgccaacttc
cccatccagaagttcctgcaggcgcagagcatcgtcctcccgagcgcctgcatctccgcc
gccacgctcgccgcgcacctcgccctcagctacctcgccgtctaccggctcgggctgggc
ctcctgggcgcgtcgctcgtgctcagcctcagctggtgggccgtcgtcgccgggcagttc
gcctacatcgcggcgtccccgcggtgcaggcggacgtggacggggttctcgtgccgggcc
ttctccggcctgccggagttcctccggctctccgccgcgtcggcggtcatgctctgcccc
gagacctggtacacgcagatcaccgtgctcatcgccgggctgctcaaggacccggagatc
gcgctcgattcgctcgcggtgtgcatgtccttgtcaggatggtcgttcatggtgtcggta
ggcttcaacgctgctgcgagcgtgagggtgagcaacgagctcggcgccgggcacgccagg
gcggcgtccttctccgtcgaggtggtgaccgcggcgtcggtggcggtggcgtgcgccatc
gccgccgccgtgatgtgcctccgcgacagcatcggctacgtcttcaccaagggggacgac
gtcgcgcgcgccgcctccgccatggccccgctgctcgccgtcaccatcgtcctcgacggc
atccagcccgtcctgtcaggtgtggcggttggctgcggttggcaggcgttcgtggcgtat
gtgaacatcgcgtgctactacggcatcgggatcccgctcggctgcgtcctggggttccac
tttgacctgggcgccatgggaatatggggcgggatggtcggtggactggttgctcagacg
cttacacttatctggatcacacttcgcaccgactgggataaagaggtacaacaggcgcgc
atgaggctaaataaatgggaacgagaagacaagaagacgccccttttggcggaagactga
DBGET
integrated database retrieval system
