Panicum virgatum (switchgrass): 120649847
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Entry
120649847 CDS
T07260
Name
(RefSeq) endoglucanase 10
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120649847
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120649847
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GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120649847
NCBI-ProteinID:
XP_039782690
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Position
9K:8078423..8082174
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AA seq
621 aa
AA seq
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MFGRDPWGGPLEISNADSATDDDRSRDLDRAALMRQLDETQQSWLLAGPGDQAGKKKKKY
VDLGCVVLDRKIFMWTVGTILGLGVFIGFIMMIVKLVPHKRPPPPPPDQYTQALHKALMF
FNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRRSLVGGFYDAGDAIKFNYPMAWSMTML
SWSVIEYKAKYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGLGDTSKGSSQ
PNDHYCWMRPEDIDYKRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVKGAKAL
YKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTIATAPGMAKHA
GAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPL
FNSFNFTKGGLIQLNHGGPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLR
KFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGFKWRETKKA
NPNALVGAMVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISIADIPTGRYSIDKNT
IFSAIPPMFPTPPPPPSAWKP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcgggacccgtggggcgggccgctggagatctccaacgccgactcggcgacg
gacgacgaccggagccgggacctggaccgggcggcgctgatgcggcagctggacgagacg
cagcagagctggctcctcgccggcccgggcgaccaggcgggcaagaagaagaagaagtac
gtcgacctcggctgcgtcgtcctcgaccgcaagatcttcatgtggaccgtcggcaccatc
ctcggcctcggcgtcttcatcggcttcatcatgatgatcgtcaagctcgtcccgcacaag
cgcccgccgccgccgccgcccgaccagtacacgcaggcgctgcacaaggcgctcatgttc
ttcaacgcccagcgatctggtccgctgcccaagcacaacggcgtcagctggaggggcaat
tcctgcatgaaggacggcctctcggacagcaccgtccggcggagcttggtcggaggcttc
tacgatgcaggggacgctatcaagttcaactaccccatggcctggtccatgaccatgctc
agctggagtgtgatcgagtacaaggccaagtatgaggccatcggcgagctcgaccatatc
aaggagctgatcaagtggggaacagattacatcctcaagaccttcaattcgtcagctgac
acaatcgacaggattgttgcccaggtgggtttaggtgacacctccaaaggcagctcccag
cctaatgaccactactgctggatgagaccagaggatatcgattacaaaaggcctgtcact
gagtgccactcttgctcagatctagcatctgaaatggctgccgccctggctgcagcttcc
atagtgttcaaggacagcaagacctactctgacaagctcgtcaaaggtgcaaaagccctg
tacaaattcggcaggctgcagcgcgggcgatacagtccgaatggatccgaccaggcaatt
ttctataattccaccagctactgggatgagtttgtgtggggtggtgcttggatgtacttt
gccacagggaacaattcatatctcacaatcgccacagccccgggaatggcaaagcatgct
ggagcctactggtttggcagtccaaactatggagtatttacctgggatgacaaacttcca
ggagctcaggttcttctcagcaggttgcgactcttcctaagtccagggtatccttacgaa
gaaatactgaggacattccacaaccaaactgacaacgttatgtgctcatatttaccttta
ttcaattcattcaacttcactaaaggaggattaatacaactcaaccatggagggcctcaa
ccacttcagtatgctgtcaacgcagctttccttgcttctttatatagtgactatcttgaa
gctgcagacacacctgggtggtactgtgggcctaatttttacaccacagaagtcctccgg
aagtttgccaggtcacagcttgattacatccttggaaagaacccactaaagatgagctac
gttgtgggttttggaaataagtaccccaaacgtcctcatcacagaggtgcatcgatacct
cataatggcgtcaagtatggatgcaaaggaggtttcaaatggagggagactaaaaaggca
aaccctaatgctctcgttggagcaatggtggctggccctgataggcatgatggtttcaaa
gatgttcgcacaaactacaattacacagagcctactcttgcagcaaatgctggtttggtt
gcagcactgatttctatagctgatataccaactggaaggtacagcatcgacaagaacaca
atcttctctgcaattcctcctatgttcccaacaccgccaccgccgccatcagcatggaaa
ccgtaa
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