Panicum virgatum (switchgrass): 120650266
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Entry
120650266 CDS
T07260
Name
(RefSeq) cationic amino acid transporter 1-like
KO
K03294
basic amino acid/polyamine antiporter, APA family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
120650266
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Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
AA_permease_C
Spore_permease
DUF2970
Motif
Other DBs
NCBI-GeneID:
120650266
NCBI-ProteinID:
XP_039783242
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Position
9K:14359130..14362828
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AA seq
597 aa
AA seq
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MAVGGGGVRQRQRGCSCAKADFFPEESFSSWSAYGRALRSTGARLADRLTSRSLESTELH
EVRARSGADMKRDLTWWDLVWFGVGAVIGAGIFVLTGQEARDTAGPAVVISYVVSGVSAM
LSVFCYTEFAVEIPVAGGSFAYLRVELGDFMAFVAAGNILLEYCIGGAAVARSWTSYFAT
LLNHHPSDFRIHASSLAPDYSELDPIAVVVIALVCVFAVVSTKGTSRFNYVLSILHIAVI
IFIIVAGLTKADTANMRDFMHYGVRGIFSASAVLFFAYIGFDAVSTMAEETKNPARDIPI
GLVGAMTLTTALYCVLAVTLCLMRPFGSIDADAPFSVAFADRGMDWAKYIVAFGALKGMT
TVLLVSAVGQARYLTHIARTHMMPPWLAQVHPRTGTPVNATIAMLVATAVIAFFTDLGIL
ANLLSISTLFIFMLVAVALLVRRYYVSGETTDADRNKLVACIAAILATSVATATCWGVDV
KGWVPYAVTVPAWFASTACLWAFVPQARAPKLWGVPLVPWLPSASIAINVFLLGSIDSKS
FMRFGIWTAALLVYYLFVGLHASYDTAKALAAESAVTAKVEEGDGKPAQGAVHDGEY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggcggcggcggcgtgcggcaacgccagcgcgggtgctcgtgcgccaaggcg
gacttcttcccggaggagtcgttctcgagctggtcggcgtacgggcgcgccctccgcagc
acgggcgcccggctggcggaccggctgacgtcgcggtcgctggagtcgacggagctgcac
gaggtgcgcgcccgcagcggcgccgacatgaagcgggacctcacgtggtgggacctcgtc
tggttcggcgtgggcgccgtcatcggcgccgggatcttcgtgctcacgggccaggaggcc
cgcgacaccgccggccccgccgtcgtcatctcctacgtcgtctccggcgtctccgccatg
ctctccgtcttctgctacacagagttcgccgtcgagatccccgtcgcaggcggatcgttc
gcgtatctgcgcgtggagctcggcgacttcatggcgttcgtggcggcgggcaacatcctg
ctggagtactgcatcggcggcgcggcggtggcgcggtcgtggacgtcctacttcgccacg
ctgctgaaccaccaccccagcgatttccgcatccacgcgtcgtcgctcgcccccgactac
tcggagctcgaccccatcgccgtcgtcgtcatcgcgctcgtctgcgtcttcgccgttgtc
agcaccaagggcacctcccgcttcaactacgtgctctccatcctccacattgccgtcatc
atcttcatcatcgtggccgggctcaccaaggccgacaccgccaacatgcgggacttcatg
cactacggcgtccgcggcatcttctcggcgtccgccgtgctctttttcgcctacatcggc
ttcgacgccgtgagcaccatggccgaggagaccaagaaccccgcgcgagacatccccatc
ggcctcgtcggcgccatgacgctcaccaccgcgctctactgcgtgctcgccgtcacgctc
tgcctcatgcggccgttcggctccatcgacgcggacgcgcccttctccgtggcgttcgcg
gacaggggcatggactgggccaagtacatcgtcgccttcggcgcgctcaaggggatgacc
accgtgctgctggtcagcgccgtcggccaggcgcgctacctcacgcacatcgcccggacg
cacatgatgccgccgtggctcgcgcaggtgcacccgcgcacggggacgcccgtgaacgcc
accatcgccatgctcgtcgccaccgccgtcatcgccttcttcaccgacctcggcatcctc
gccaacctgctctccatctccacgctcttcatcttcatgctcgtcgccgtggcgctgctg
gtgcgccgctactacgtatccggggagaccacggacgccgaccggaacaagctggtggcg
tgcatcgccgccatcctggcgacgtcggtggcgacggcgacgtgctggggggtggacgtc
aaggggtgggtgccgtacgcggtgacggtgcccgcgtggttcgcgtcgacggcgtgcctg
tgggcgttcgtgccgcaggcgagggcgcccaagctgtggggggtgccgctggtgccgtgg
ctgccgtcggcgtccatcgccatcaacgtcttcctgctgggctccatcgactccaagtcg
ttcatgcggttcgggatatggacggccgcgctgctcgtctactacctcttcgtcggcctg
cacgcgtcctacgacacggccaaggcgctcgccgccgagtccgccgtgactgccaaggtg
gaggagggcgacggcaagccggcgcaaggcgccgtacacgacggcgagtactga
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