Panicum virgatum (switchgrass): 120650800
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Entry
120650800 CDS
T07260
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120650800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120650800
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120650800
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
120650800
NCBI-ProteinID:
XP_039784015
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All DBs
Position
9K:complement(22415489..22418739)
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AA seq
327 aa
AA seq
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MKRSAMDLRQEQPPRYKIQVKMVKTVALDVRSTDTVDQIKSNISAIEGIDKSQQVLFFGG
NQLENNNRLADYNIMTNSSVDLYVTDGMQISVSIPSVGKTIKLNLKKSQSVADVKSEIEQ
MVGIPLDEQILMYGCKQLEDNKLFSQCGLSNGHTLHVLVRPTDKLRISVNVDGERTMNLD
VKSWYTVADVKLMIETFEGLPARSQILMRTQPGGAETLEDTETLQNQHIRNNDTLVLHQN
IQFFVKTYEGKSLMLSMRTCDTTDKVMEKVEAKLLMKAGVYYLRYRGHVMCPGDTLQKHK
VETNSTVDVRLRNSNECSIQACQNKTH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggagcgccatggacctgcgccaggagcagccacctcgctacaagatccaggtc
aagatggtgaaaacggtggcgcttgatgtgaggtccactgataccgttgatcagatcaag
tctaacataagtgccatagaggggattgacaagagccagcaagtgctcttttttggtgga
aatcagttggagaacaacaacaggctcgctgattacaacatcatgacaaactcttctgtc
gacctctatgtaaccgacgggatgcaaatatctgtcagtatcccctcggttggaaagaca
atcaagctcaatttgaagaaatcccagagtgttgctgatgtcaagtcagagatcgaacag
atggtgggaattcctctggatgaacaaatcctgatgtatggatgcaaacagcttgaggac
aacaagttgttcagtcagtgtggtttgagcaatggccacaccctgcatgttctggtccgc
ccaactgacaagctgcgtatatctgtcaatgttgatggtgaaagaactatgaatctggat
gtcaaaagctggtatactgttgctgatgtcaagttgatgattgagacctttgagggttta
cctgcacgctcacagatactaatgcgaactcaacctggcggtgctgaaacactggaagac
actgaaacgctgcaaaatcagcacatcaggaacaatgacaccctcgtgctacatcagaat
atccaattcttcgtcaagacatatgaagggaagtcgttaatgttgtctatgaggacgtgt
gacacgacggacaaagtcatggagaaggttgaagcaaagctgctgatgaaggcaggtgtc
tactacttgcgctacagggggcatgttatgtgtcctggggatactcttcagaagcacaag
gtcgagaccaattccactgtcgatgtccgccttcggaattcaaatgaatgtagtatccaa
gcatgccaaaacaaaacacactag
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