Panicum virgatum (switchgrass): 120650830
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Entry
120650830 CDS
T07260
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120650830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120650830
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
120650830
BRITE hierarchy
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
NinF
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120650830
NCBI-ProteinID:
XP_039784050
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Position
9K:complement(22908300..22915418)
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AA seq
394 aa
AA seq
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MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSLGVFALRRPLLHKVLDYEDEFFALLM
GVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRKSPGTESSDKVYDSALRKRQKILSVVF
LVVLPYFKSKLQSIYNKEREARLQATLWGQDDVRFDEAGFVLDQEQTSQAQNDPATGGVS
NLTRFKKNFASLIGVCYPWIHATNEGLSFAYQLLYLLDATAFYSPALHVLGIHVCRATGQ
ELMDSSSRISRIRNRELERLRGPPWLKAVQRVFLSCLYTTLDYAQTGLIAAVFFFKMMEW
WYQSAEERMSAPTVYPPPPPPPTPKVAKDGIPLPTDKTLCPLCCQKRANPSVLSVSGFVF
CYSCIFKSVSQHKRCPVTLMPATVEQIRRLFHDL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccaggtgggagggcagggcgcgcggcccaccttcttcgagatgtcggccgcg
cagcagcttcccgccagcctccgcgccgcgctcacctactcgctcggggtttttgcacta
agaaggccattactacacaaagttttagattatgaagatgaattctttgctttgttaatg
ggtgtccttgagtctcacagtctacgaacaacagatggttctttttcagagtcattatat
ggtctcaggaggagacctgttaaggtttcagtgaagagaaagagccctggtacagaatcc
agtgacaaagtctatgattctgcactaaggaagcgccagaaaatcctctcagtggttttc
ttggttgttttgccatattttaagtcaaagttgcagtctatatacaataaagaaagggaa
gccaggttgcaggcaactctttggggtcaggatgatgtgaggtttgatgaagccggcttt
gtattagatcaggagcagacttctcaagcacagaatgaccctgcaactggaggagtatca
aacttgacacgttttaagaaaaattttgcctcactcataggtgtttgctatccatggatt
catgcaactaatgaaggtctgtcatttgcataccagctgctatatctgttggatgccact
gctttttatagtccagcactgcatgtgctagggattcacgtttgtcgtgctactggacaa
gagctgatggattcatcttctaggatatcaaggattagaaaccgtgaacttgagagactt
cgtggtcctccatggttgaaggctgtgcagcgggtgttccttagttgtttatatacaact
ctagattatgcacaaacaggtttaattgctgcagtcttctttttcaagatgatggagtgg
tggtaccaatctgctgaagaaagaatgtcagctccgactgtatacccaccgccgcctcca
ccaccaactccaaaggttgccaaagatggaatccccttaccaactgacaagacgctctgc
cccctgtgctgccagaagcgcgccaacccttctgttctttctgtttctggttttgtattt
tgctacagctgcatattcaagtccgtctctcagcataaaaggtgccctgtcacgctgatg
cctgccactgttgaacaaattaggcgcctcttccatgatttgtag
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