KEGG   Panicum virgatum (switchgrass): 120650830
Entry
120650830         CDS       T07260                                 
Name
(RefSeq) peroxisome biogenesis protein 12
  KO
K13345  peroxin-12
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    120650830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120650830
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    120650830
SSDB
Motif
Pfam: Pex2_Pex12 zf-C3HC4_2 zf-C3HC4_3 NinF zf-RING_2 zf-C3HC4 zf-RING_UBOX
Other DBs
NCBI-GeneID: 120650830
NCBI-ProteinID: XP_039784050
LinkDB
Position
9K:complement(22908300..22915418)
AA seq 394 aa
MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSLGVFALRRPLLHKVLDYEDEFFALLM
GVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRKSPGTESSDKVYDSALRKRQKILSVVF
LVVLPYFKSKLQSIYNKEREARLQATLWGQDDVRFDEAGFVLDQEQTSQAQNDPATGGVS
NLTRFKKNFASLIGVCYPWIHATNEGLSFAYQLLYLLDATAFYSPALHVLGIHVCRATGQ
ELMDSSSRISRIRNRELERLRGPPWLKAVQRVFLSCLYTTLDYAQTGLIAAVFFFKMMEW
WYQSAEERMSAPTVYPPPPPPPTPKVAKDGIPLPTDKTLCPLCCQKRANPSVLSVSGFVF
CYSCIFKSVSQHKRCPVTLMPATVEQIRRLFHDL
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgctgttccaggtgggagggcagggcgcgcggcccaccttcttcgagatgtcggccgcg
cagcagcttcccgccagcctccgcgccgcgctcacctactcgctcggggtttttgcacta
agaaggccattactacacaaagttttagattatgaagatgaattctttgctttgttaatg
ggtgtccttgagtctcacagtctacgaacaacagatggttctttttcagagtcattatat
ggtctcaggaggagacctgttaaggtttcagtgaagagaaagagccctggtacagaatcc
agtgacaaagtctatgattctgcactaaggaagcgccagaaaatcctctcagtggttttc
ttggttgttttgccatattttaagtcaaagttgcagtctatatacaataaagaaagggaa
gccaggttgcaggcaactctttggggtcaggatgatgtgaggtttgatgaagccggcttt
gtattagatcaggagcagacttctcaagcacagaatgaccctgcaactggaggagtatca
aacttgacacgttttaagaaaaattttgcctcactcataggtgtttgctatccatggatt
catgcaactaatgaaggtctgtcatttgcataccagctgctatatctgttggatgccact
gctttttatagtccagcactgcatgtgctagggattcacgtttgtcgtgctactggacaa
gagctgatggattcatcttctaggatatcaaggattagaaaccgtgaacttgagagactt
cgtggtcctccatggttgaaggctgtgcagcgggtgttccttagttgtttatatacaact
ctagattatgcacaaacaggtttaattgctgcagtcttctttttcaagatgatggagtgg
tggtaccaatctgctgaagaaagaatgtcagctccgactgtatacccaccgccgcctcca
ccaccaactccaaaggttgccaaagatggaatccccttaccaactgacaagacgctctgc
cccctgtgctgccagaagcgcgccaacccttctgttctttctgtttctggttttgtattt
tgctacagctgcatattcaagtccgtctctcagcataaaaggtgccctgtcacgctgatg
cctgccactgttgaacaaattaggcgcctcttccatgatttgtag

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