Panicum virgatum (switchgrass): 120653000
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Entry
120653000 CDS
T07260
Name
(RefSeq) calcium-dependent lipid-binding protein-like
KO
K28063
extended synaptotagmin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120653000
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
120653000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
Sporozoite_P67
RGS
Motif
Other DBs
NCBI-GeneID:
120653000
NCBI-ProteinID:
XP_039786919
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All DBs
Position
9K:60782881..60786507
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AA seq
510 aa
AA seq
DB search
MGFISGFVMGMIVGVALIAGWGRAMARRAAKRSNKAVDINSLGSLNREDVKKICGENVPQ
WISFPEYEQVKWLNKQLSKLWPFIEEAATMVIRDSVEPLLDEYRPPGISSLKFSRLSLGT
VPPKIEGIRIQSFKKGQLTMDMDFRWGGDPNIILAVETLVASLPIQFKNLQVYSIIRVVF
QLSDEIPCISAVVVALLAEPKPRIDYVLKAVGGSLTAMPGLSDMIDDTVASLITDMLQWP
HRIVVPLGGVDVDVSDLELKPHGKLTVTVVRAESLKNKELIGKSDPYVVLFIRPMFREKT
SIIDDNLNPQWNETFELIAEDKETQALILEVFDEDKMKQDKRLGIAKLPLSDLGMETVKE
VNLQLLSSLDTTKVKDKKDRGVLTIKVLYHQFTKAEAQEALELEKRTVEERRKVRSETAA
VSGAADAATGTTSTVTNASATGVATTGSGTSSASAGSGAGMVGTGIGAVGSGIGAFGSGL
SKAGKFVGRTVTGPFSSARRSASSVPNIDD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggggttcatatcgggattcgtaatggggatgatcgtcggcgtcgccctgatcgccggc
tgggggcgcgccatggctcgccgcgccgccaagcgcagcaacaaggctgtagatatcaat
tcactgggatctctcaaccgtgaagacgtgaagaaaatatgtggagaaaatgtcccccag
tggatatcattcccagaatatgaacaggtcaaatggctcaacaaacaattgagcaagctt
tggccctttattgaagaggcagcaaccatggtcatcagggattctgtggaaccactactc
gatgaatatcgaccgccagggatatcctcactgaagttcagcagactctctcttgggact
gttccaccgaaaatagaaggtattcggattcagagttttaagaaagggcagcttacaatg
gacatggacttccggtggggtggggatccaaatatcattcttgcagtcgaaacacttgtt
gcttcacttcccattcagtttaagaaccttcaggtgtacagcatcatccgtgtggtcttc
caattgtcagacgagataccatgcatctctgctgttgttgttgctcttctggcagagcca
aaaccgagaatcgactacgtactgaaagccgtgggaggaagcctgaccgcgatgcctggg
ctttcagacatgattgacgatacagtggcgtcattgatcactgacatgctccaatggcca
catagaattgttgttccgctgggtggagtcgacgtggacgtcagcgaccttgagctgaag
ccacacgggaagctcacggtcaccgtggtgcgcgcggaatccctcaagaacaaggagctc
atcggcaaatccgacccctacgtggtcctgttcatacgcccaatgttcagggagaagacc
agtatcatcgacgacaacctcaaccctcagtggaacgagacgttcgagctgatcgccgaa
gacaaggagacgcaggctctgattcttgaggtgttcgacgaggacaagatgaagcaggac
aagaggctgggaatcgccaagctgcccctgagcgacctggggatggagaccgtgaaagag
gtgaacctgcagctgctgtcgtcgctggacacgaccaaggtcaaggacaagaaggacaga
ggcgtgctcaccatcaaggtgctgtaccaccagttcaccaaggcggaggcgcaggaggcc
ctggagctggagaagcggaccgtggaggagcggcggaaggtgaggagcgagacggcggcc
gtcagcggcgccgcggacgcggccaccggcacgacgtccacggtcaccaacgcgtccgcc
acgggcgtcgcgacgaccggctcgggcaccagttccgcttccgccggctcgggcgccggg
atggtgggcacgggcatcggcgccgtgggctccggaattggcgccttcgggagcggtctc
agcaaggccggcaagtttgtcggccggaccgtcacaggacctttcagcagcgccaggcgc
agtgccagcagcgtccccaacatcgacgattga
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