Panicum virgatum (switchgrass): 120653268
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Entry
120653268 CDS
T07260
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120653268
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP100
120653268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA_5
AAA_lid_9
AAA
Sigma54_activat
AAA_22
DNA_pol3_delta2
bpMoxR
T2SSE
RuvB_N
AAA_14
AAA_7
AAA_16
nSTAND3
Mg_chelatase
AAA_18
ABC_tran
IstB_IS21
Zeta_toxin
DUF87
RNA_helicase
CENPH
Torsin
AAA_28
TsaE
PduV-EutP
Bot1p
Prominin
Motif
Other DBs
NCBI-GeneID:
120653268
NCBI-ProteinID:
XP_039786976
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All DBs
Position
1N:complement(9105917..9110181)
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AA seq
546 aa
AA seq
DB search
MGGLDSAAATVTTAASLVADAYMAAPADVAAAPATAAAAISPVSYIVWTYFVPTCRHLPD
KAIDLVDEACANVRVQLDSQPEEIDKLVRKRIELQVHLHALEKETDKQRKAQLVKVRKEL
DDLRPELQPLQTKYRKEKQRIDEIRKLKQRREEMLSNLEEAERRQRLDRAADIRYGALPE
VETAIAKLEAEAGDNMMLVEAVSPEQIAEVVSRWTGIPVTSLGQNEKERLIGLADSLHKR
VIGQEESVNAVADAVLRSRAGLGRPQQPIGSFLFLGPTGVGKTELAKALAEQLFYDEKHL
VRMDMSEYAEQHSVARLIGAPPGYVGHEEGGQLTELVRKRPYRVILLDEVEKAHVAVFNT
LLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGAEHLQSWMKGNISMKVAHDQVMVKVKEH
FQPELLNRLDEIVVFNPLKHEQLRKVCRLQMDDVERLLEKHGVALTVDAATLDKIVSLSY
DPVYNARPIRRWIQKSVATQLSKMLVQGEIGENSRVYIDATADREDLTYRVEKNGGLVNG
HRGEAR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcttggattcagcagcagcaaccgtcaccaccgcagcaagcttggtcgcagac
gcctacatggccgcccccgccgatgtggccgcagcacccgccaccgctgccgccgccatc
agccccgtgagttacattgtatggacttattttgtaccaacttgtcgccatctgcctgac
aaagcaatcgacttggtcgacgaggcctgcgcaaacgtgcgggtgcagcttgacagccag
ccggaagagatcgacaagctcgtgaggaagagaatcgagcttcaagtccacctccacgcg
ctcgagaaggagacggacaaacaaaggaaagctcagctagtcaaggtcaggaaagaattg
gacgatctgagacccgagctgcagccgctgcagacgaagtatcgcaaggagaaacaaagg
atagacgagatcaggaagctaaagcagcgtcgagaggagatgctgtcgaacctagaggag
gccgagcgccggcagcgtctagaccgtgcggccgacatcagatacggtgccctcccggag
gtcgagaccgccatcgccaagctagaggctgaggctggggacaacatgatgttagttgag
gccgtcagccccgagcaaattgctgaggttgtgagccggtggaccgggattccggtgact
agccttggacagaatgaaaaggagaggctgattggtttggctgatagtctgcacaagaga
gttattggacaggaagaatctgtcaacgcagttgcagatgctgttttaaggtccagggct
ggtcttggacggccacagcagcctattggttcattccttttcctcggacccaccggtgta
ggcaaaaccgaactcgccaaggcccttgctgagcagctattttacgatgagaaacacctt
gtccgcatggacatgtctgaatacgcggagcagcattcagttgcccggctcattggagca
ccacctggctatgttggccatgaggagggagggcaactaactgaactggtgaggaagagg
ccgtacagggttatcctccttgatgaggtcgagaaggcacacgtagcagtgttcaacact
ctgctccaggtcttggatgatgggagattgaccgatggtcaaggcaggaccgtggacttc
aagaatacagtgatcatcatgacatcaaaccttggcgccgagcatctccaaagctggatg
aagggtaacatctccatgaaggttgctcatgatcaggtcatggtgaaggtgaaagagcat
ttccagcctgagctactgaaccgtctggatgagattgttgtcttcaatcctctcaagcat
gagcagctgaggaaggtttgccggctgcagatggacgatgttgaacgcctccttgaaaag
catggtgttgctttgacagtggatgctgctaccttggacaagatcgtgtccctatcttat
gatccggtatacaatgccaggccaatcaggagatggattcaaaagagtgtagccacccaa
ctgtccaagatgctggtccagggagaaataggtgagaattccagggtgtacatagatgcc
acggccgacagagaagacctgacttacagggtcgagaagaatggaggattggtgaatggg
cacaggggcgaagccagataa
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