KEGG   Panicum virgatum (switchgrass): 120653268
Entry
120653268         CDS       T07260                                 
Name
(RefSeq) chaperone protein ClpB1-like
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120653268
Chaperones and folding catalysts [BR:pvir03110]
 Heat shock proteins
  HSP100
   120653268
SSDB
Motif
Pfam: AAA_2 ClpB_D2-small AAA_5 AAA_lid_9 AAA Sigma54_activat AAA_22 DNA_pol3_delta2 bpMoxR T2SSE RuvB_N AAA_14 AAA_7 AAA_16 nSTAND3 Mg_chelatase AAA_18 ABC_tran IstB_IS21 Zeta_toxin DUF87 RNA_helicase CENPH Torsin AAA_28 TsaE PduV-EutP Bot1p Prominin
Other DBs
NCBI-GeneID: 120653268
NCBI-ProteinID: XP_039786976
LinkDB
Position
1N:complement(9105917..9110181)
AA seq 546 aa
MGGLDSAAATVTTAASLVADAYMAAPADVAAAPATAAAAISPVSYIVWTYFVPTCRHLPD
KAIDLVDEACANVRVQLDSQPEEIDKLVRKRIELQVHLHALEKETDKQRKAQLVKVRKEL
DDLRPELQPLQTKYRKEKQRIDEIRKLKQRREEMLSNLEEAERRQRLDRAADIRYGALPE
VETAIAKLEAEAGDNMMLVEAVSPEQIAEVVSRWTGIPVTSLGQNEKERLIGLADSLHKR
VIGQEESVNAVADAVLRSRAGLGRPQQPIGSFLFLGPTGVGKTELAKALAEQLFYDEKHL
VRMDMSEYAEQHSVARLIGAPPGYVGHEEGGQLTELVRKRPYRVILLDEVEKAHVAVFNT
LLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGAEHLQSWMKGNISMKVAHDQVMVKVKEH
FQPELLNRLDEIVVFNPLKHEQLRKVCRLQMDDVERLLEKHGVALTVDAATLDKIVSLSY
DPVYNARPIRRWIQKSVATQLSKMLVQGEIGENSRVYIDATADREDLTYRVEKNGGLVNG
HRGEAR
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgggtggcttggattcagcagcagcaaccgtcaccaccgcagcaagcttggtcgcagac
gcctacatggccgcccccgccgatgtggccgcagcacccgccaccgctgccgccgccatc
agccccgtgagttacattgtatggacttattttgtaccaacttgtcgccatctgcctgac
aaagcaatcgacttggtcgacgaggcctgcgcaaacgtgcgggtgcagcttgacagccag
ccggaagagatcgacaagctcgtgaggaagagaatcgagcttcaagtccacctccacgcg
ctcgagaaggagacggacaaacaaaggaaagctcagctagtcaaggtcaggaaagaattg
gacgatctgagacccgagctgcagccgctgcagacgaagtatcgcaaggagaaacaaagg
atagacgagatcaggaagctaaagcagcgtcgagaggagatgctgtcgaacctagaggag
gccgagcgccggcagcgtctagaccgtgcggccgacatcagatacggtgccctcccggag
gtcgagaccgccatcgccaagctagaggctgaggctggggacaacatgatgttagttgag
gccgtcagccccgagcaaattgctgaggttgtgagccggtggaccgggattccggtgact
agccttggacagaatgaaaaggagaggctgattggtttggctgatagtctgcacaagaga
gttattggacaggaagaatctgtcaacgcagttgcagatgctgttttaaggtccagggct
ggtcttggacggccacagcagcctattggttcattccttttcctcggacccaccggtgta
ggcaaaaccgaactcgccaaggcccttgctgagcagctattttacgatgagaaacacctt
gtccgcatggacatgtctgaatacgcggagcagcattcagttgcccggctcattggagca
ccacctggctatgttggccatgaggagggagggcaactaactgaactggtgaggaagagg
ccgtacagggttatcctccttgatgaggtcgagaaggcacacgtagcagtgttcaacact
ctgctccaggtcttggatgatgggagattgaccgatggtcaaggcaggaccgtggacttc
aagaatacagtgatcatcatgacatcaaaccttggcgccgagcatctccaaagctggatg
aagggtaacatctccatgaaggttgctcatgatcaggtcatggtgaaggtgaaagagcat
ttccagcctgagctactgaaccgtctggatgagattgttgtcttcaatcctctcaagcat
gagcagctgaggaaggtttgccggctgcagatggacgatgttgaacgcctccttgaaaag
catggtgttgctttgacagtggatgctgctaccttggacaagatcgtgtccctatcttat
gatccggtatacaatgccaggccaatcaggagatggattcaaaagagtgtagccacccaa
ctgtccaagatgctggtccagggagaaataggtgagaattccagggtgtacatagatgcc
acggccgacagagaagacctgacttacagggtcgagaagaatggaggattggtgaatggg
cacaggggcgaagccagataa

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