Panicum virgatum (switchgrass): 120653808
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Entry
120653808 CDS
T07260
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K14396
polyadenylate-binding protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120653808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120653808
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120653808
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
VapE-like_dom
RRM_7
Motif
Other DBs
NCBI-GeneID:
120653808
NCBI-ProteinID:
XP_039787414
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All DBs
Position
1N:complement(61930148..61934695)
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AA seq
212 aa
AA seq
DB search
MDEEEHEVYGQEIPEDGDMDGADVDMAAGGDDAAKLQELDEMKRRLKEMEEEAAALRDMQ
AKVAKEMQGGDPSASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTD
KFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPRGYNPYHG
YPYRSYGAPYFPPYGYGRAPRFRRPMRYRPYF
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggagcacgaggtgtacggccaggagatcccggaggacggcgacatggac
ggcgccgacgtcgatatggccgccggcggggacgacgcggcgaagctgcaggagctcgac
gagatgaagcgcaggctgaaggagatggaggaggaggctgccgccctccgcgatatgcag
gccaaggtcgccaaggagatgcaaggaggtgaccctagtgcatctacagctgaggcgaag
gagcaggtggatgcccgctctgtgtatgttggaaatgttgattatgcgtgtacaccagaa
gaagtacagcagcacttccaagcttgtggaactgtcaatcgggtgacaatcttgaccgac
aagtttgggcagccaaaaggttttgcttatgttgaatttctggaacaagaagctgtccag
gaggctcttaatttgaatgaatcagagttgcatggtcgccaaattaaggttgcaccgaag
aggactaatgtccctgggatgaagcagcgtccaccacgcgggtataacccgtaccatggc
tacccatatagatcatacggagcaccatacttccccccatatggttatgggagggctcca
agattccgccggccaatgcgctacaggccttacttctga
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