Panicum virgatum (switchgrass): 120654604
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Entry
120654604 CDS
T07260
Name
(RefSeq) probable histone acetyltransferase HAC-like 1 isoform X1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120654604
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120654604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120654604
03036 Chromosome and associated proteins [BR:
pvir03036
]
120654604
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120654604
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120654604
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
120654604
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120654604
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
120654604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
ZZ
PHD
Motif
Other DBs
NCBI-GeneID:
120654604
NCBI-ProteinID:
XP_039788109
LinkDB
All DBs
Position
1N:3275587..3298033
Genome browser
AA seq
1717 aa
AA seq
DB search
MNVGQAAHLSGQMSGQAAQMNQVANSGLGVGVGGADGLQHQQHQPMQDMAADQQFVMIRT
AMREKIFEYIGSKQSSAEWRKRLPELTKRLEEILYRKFPNRNDYCNMTKGPVEPQLQFAI
KTLSAQNQQNQQNPQVSRQIASSSGYGTMIPTPGMTQSTSGNSRIPYVTDNNTLSSSGST
MVPQNANMGASMPGSMSNGYQHLNNTIAQNSTPNSIQSTMGSVGVQRQLPHMIPTPGFSN
QQSVPANPDYSNGTGYFNGESAVAPHMQHQKQFSSNQNSNQIQHIGSHSNSGIHSSMLDN
SSAYGLSDGHMNGGIGLHGSNMQLTNRTSAPEAYMNISNPYGNSPKPLQQQFNQHPQQRI
PTSVDMSGSSSFYAAGSTPLTTANSQSMNVANLQSRSRMNPMLVNNQLNIQSIQPQSQIK
TEVLDQPEKVNFQSSQLTQDQLLRQHSMPHQVPPNSQFVQNHYHINQQQLNPQHQQAMLR
SNSFKQSQMASSHSMQLSEQGTLPHTELVSSQASDPVDLPSFPGQYQQRNALDNVKGGQM
FGNLSGSQNFHASASHVSQQLLPSNPQLDDGSNDVSYGLKGSQADQMLRPQWQPQTMEKA
PMTTNSSLEKQIHEDFCQRTRTQDGAQQPFSSDWRLSHCTVTSIDPAVPKPTGGGFEQVT
GNIHYLRQIRWLLLLFHAKSCTYPVGSCKFHGCVQVQELLKHFQNCQRKDCSYRSCSRSK
MVFHHYKTCVDEQCPVCSIVRKFLRQSTEQASKQKALESRKLAQQNVTQRIMNGVEGDRM
NVDPVSAEVFDDQPSVPKRLKMQPPSPSAPENDICVTSNPHVNPGFVLQETQPEQLEHSN
RGTYLKREIDAKADMRAPQKPIKSGYSIDGNVTTRHNPSAPNDMNIKQENLSIDKVTSET
AIEVKNETNDPADATVSKSGKPKIKGVSLTELFTPEQIKEHIDSLRLWVGQSKAKAEKNQ
AIGHSENENSCQLCRVEKLTFEPPPIYCSPCGARIKRNAPYYTVGTGDTRHYFCIPCYNE
SRGETIEVEGQAFLKAKLEKKRNDEETEEWWVQCDKCECWQHQICALFNGRRNDGGQAEY
TCPNCYVEEVKCGLRKPLPQSAVLGAKDLPRTVLSDHIEDRLFKRLKQEKQDRAAAAGKN
IDEIPGAEGLVVRVVSSVDKKLEVKPRFMEIYGEDNYPQEFPYKSKAVLLFQKIEGVEVC
LFGMYVQEFGAECSFPNQRRVYLSYLDSVKYFRPEIKTVSGEALRTFVYHEILIGYLEYC
KLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKEEIVVELTN
LYDHFFITMGECKAKVTAARLPYFDGDYWPGAAEDMISQLRQEEDDRKLQKKSKTKKIIT
KRALKAAGQTDLSGNASKDAMLMQKLGETIYPMKEDFIMVHLQYSCSHCCVLMVSGRRWV
CHQCRSFYICDKCYDAEQQLEDRERHPSNSRDTHMLHPVDIIGVPKDTKDRDDILESEFF
DTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNVCCHDIETGQGWR
CEVCPDFDVCNACFQKGAVNHPHNLTNHPSAADRDAQNAEARQMRVQQLRKMLDLLVHAS
TCRSGSCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYMLQLHARACKDSECNVPRC
RDLKEHLRRLQQQSDSRRRAAVNEMMRQRAAEVAANE
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggggcaggctgcccacctgtccgggcagatgtctgggcaagcagcgcagatg
aatcaggttgccaacagcggtctcggcgttggtgttggtggtgccgacgggctccagcac
cagcagcaccagccgatgcaggatatggcggcggaccagcagtttgtgatgattcggacc
gctatgcgtgaaaagatattcgagtatataggaagtaaacaatcatcggctgagtggcgg
aagcggttgccggaacttacaaagcggcttgaggagatcttgtataggaaattcccaaac
aggaatgactactgcaatatgacgaagggacctgttgagccacaattgcagtttgctatt
aagaccctgagtgctcagaaccagcaaaatcaacaaaacccacaagtgtcaaggcaaata
gcatcttcctctggctatggcacgatgattccaacacctggtatgacgcaaagcaccagt
ggaaattctaggattccttatgtcacagacaacaatactctttcatcgtctggttcaacc
atggttcctcagaatgccaacatgggtgcctcgatgccaggttcgatgtctaatgggtac
caacatttaaataacaccattgcacaaaattctaccccaaatagcatccaatcaacaatg
ggttcagttggtgttcagcgacaactacctcatatgatcccgactccaggattcagtaat
caacagagtgtacctgccaatcctgactattcaaatggaaccggatatttcaatggtgag
tcagctgtggcaccacatatgcagcaccagaagcaattttctagcaaccaaaatagcaat
caaattcagcacattgggagccacagtaattctgggatacattcaagcatgctggacaac
tcgtctgcatatggtctatcagatgggcacatgaatggtggaataggattgcatgggtca
aacatgcagttaacaaacaggacttcggcaccagaagcatatatgaatatatcaaaccct
tatggcaattcgcccaaacctctgcagcaacaattcaatcagcaccctcagcagagaata
ccgacatcagttgatatgtctggttccagcagtttttatgctgctggctctacaccttta
accacagcgaatagtcagagcatgaatgttgcaaatttgcagtctagatcaagaatgaat
ccaatgttggttaacaatcagttaaacatccagtctattcaaccacagtctcagataaaa
actgaggttttggatcaaccagaaaaggtgaactttcagtcgtcccagttgactcaagac
caactactacgccagcactcaatgccacatcaggtgccgcccaattcccagtttgtgcaa
aatcactatcatataaatcaacagcagctaaatccacagcatcagcaggctatgctgagg
agcaattcctttaaacagtctcaaatggcttccagccattcaatgcaactgtcagaacag
ggtactctgccacacactgaattggtatcttcgcaggctagtgatcctgttgatcttcca
agcttcccgggtcaataccaacaaagaaatgctcttgacaatgttaaaggagggcagatg
tttggcaatctgtctggctctcaaaattttcatgcttctgcctcacatgtttctcagcaa
ttgttgccctctaatccgcagcttgatgacggttccaatgatgtgagctatgggctgaaa
ggatcacaggcagaccaaatgctgcggcctcaatggcagccacaaacaatggaaaaggct
cctatgactactaattcatcacttgaaaaacaaatacatgaagatttttgtcaaagaacc
aggacacaggatggagcgcaacaaccattttcatctgattggcgtctttctcattgcact
gtgacttcaattgatcctgctgtgccaaagcccacaggtgggggattcgaacaggtcact
ggaaatatccattacctccgtcagataaggtggttgctgttactgtttcatgcaaaatca
tgcacatatcctgttgggagttgtaagtttcatggctgtgttcaggtgcaagagcttttg
aagcattttcagaactgtcaaagaaaagattgttcatacaggagctgcagtaggtcaaaa
atggtctttcaccattataaaacttgtgtcgatgagcagtgtcctgtatgcagcattgta
aggaagtttttgcgccaatcgactgaacaggcatctaagcaaaaagctctcgagtctaga
aaacttgctcaacaaaatgtgactcaaagaatcatgaatggggtagaaggtgatagaatg
aatgttgacccagtgtcagctgaagtgtttgatgatcaaccatctgtaccaaaacgttta
aagatgcagcctccatcacccagtgctccagagaatgatatctgtgtaacctccaatcct
catgtaaacccaggctttgtactgcaggaaacacagcctgagcagcttgagcacagtaac
agagggacatatttgaaacgggagatagatgcaaaggctgacatgcgagctccgcaaaag
cctataaaaagtggttacagtattgatggaaatgtgactacaaggcataacccaagtgct
ccgaatgatatgaacatcaagcaagagaacttgtccattgacaaagtgacaagtgaaaca
gccattgaggttaagaatgaaacaaatgacccagcagatgccacagtgtctaaatcagga
aaaccaaaaataaaaggtgtctcattgactgaattgttcactccagaacaaataaaggaa
catatcgacagcctaaggctgtgggttggtcagagcaaggctaaagctgaaaagaatcaa
gctattggtcactctgagaatgagaactcttgccagctctgtagagtggagaagcttact
ttcgaaccgccaccaatatattgttctccttgtggagctcggataaagcgaaatgcacca
tactacactgtaggtactggtgatacacgccattacttctgtatcccttgttacaatgag
tcccgtggtgagactatcgaggttgaagggcaagcatttttgaaggcgaagttagagaaa
aaacgaaatgatgaggaaacggaagaatggtgggttcagtgtgacaagtgtgaatgctgg
caacatcaaatttgtgctctatttaatggcagaagaaatgatggaggacaagctgaatat
acttgccccaactgttatgttgaggaggtgaaatgtgggctgcgcaagcctttaccacag
agtgcagttcttggggcgaaagacctgccaagaactgttcttagtgatcatattgaagat
cggctctttaaacgacttaagcaggagaaacaggaccgtgcggctgctgctgggaaaaat
attgatgagattcctggagcggaaggtcttgtcgtcagggttgtttcatctgtggataag
aagctggaggttaaaccacgttttatggaaatttatggagaagacaactaccctcaagag
ttcccttacaagtccaaggctgttctcttgttccagaaaatagaaggtgtggaagtatgc
ctatttggaatgtatgttcaagaatttggtgcagaatgctctttcccaaaccagcgtcgt
gtttatttatcatacttggattctgttaagtacttcagacctgagattaaaacagtatcg
ggagaggccttacgcacattcgtgtatcatgaaattctgatagggtatcttgaatactgt
aaactgcgtggattcacaagctgttacatatgggcttgcccacctttgaagggtgaagat
tacatcttatattgccatcctgagattcaaaagactccaaaatctgacaagctgcgtgag
tggtacttatctatgctgcggaaagcttctaaggaggaaattgttgttgagctgacaaat
ctctatgaccatttcttcattactatgggggagtgcaaggctaaggtgactgctgctcgc
ttgccgtacttcgatggagattattggccaggagctgcagaagatatgatcagtcaactc
cgtcaagaagaggatgaccgcaagcttcagaagaagagtaagacaaagaagattatcaca
aaaagagctcttaaagctgctggccagacagatctcagtgggaatgcttccaaggatgca
atgctgatgcaaaagcttggagaaaccatatatcctatgaaggaagatttcattatggtc
catttacagtattcatgtagtcactgttgtgtccttatggtgtcaggaagacgttgggtt
tgccatcaatgcagaagcttttacatctgtgacaagtgttatgatgcagaacaacaactt
gaagaccgggagaggcacccgagtaacagtagagacacgcatatgctccatccggttgat
attatcggggtgcccaaagatacaaaagatagagatgacatcttagaaagtgagtttttt
gacaccaggcaagcatttctcagtctttgtcaagggaaccattatcagtatgacacactt
cgccgcgcaaagcactcatcaatgatggtgttgtaccacctacacaatccaactgcacca
gcatttgtcactacatgcaatgtctgctgtcatgatattgaaactggtcaaggctggcga
tgtgaagtttgtccagatttcgatgtgtgcaatgcttgtttccaaaaaggagcagtcaat
catcctcacaatttaacaaaccatccatcagctgcagaccgtgatgcccaaaatgcagaa
gctcggcaaatgcgtgttcagcagctaaggaagatgcttgatcttctggtacatgcatca
acatgccgctctggtagttgccagtatcctaactgccggaaagtcaagggactattccgt
catggaatgcagtgcaaaacacgtgcttctggaggctgtgtcctttgcaagaaaatgtgg
tacatgcttcaactccatgcccgagcttgcaaagattcagaatgcaatgtgccgcggtgc
agggatctcaaggagcaccttagaaggttgcaacagcagtctgattccaggaggagggct
gctgtaaatgaaatgatgaggcaaagagcagcagaagtcgccgcaaatgagtag
DBGET
integrated database retrieval system
