Panicum virgatum (switchgrass): 120654690
Help
Entry
120654690 CDS
T07260
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120654690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120654690
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120654690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Dsc3_N
Ubiquitin_5
UBL_UBAC1
Plexin_RBD
OTU1_UBXL
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120654690
NCBI-ProteinID:
XP_039788234
LinkDB
All DBs
Position
1N:4187583..4190040
Genome browser
AA seq
187 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGQGGHPPGSATSDLCWQAA
GGWPHAC
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccctcaccggcaagaccatcaccctcgaggtggagtcttct
gacaccattgacaatgtcaaagccaagatccaggacaaggaaggcattcccccagaccag
cagcggctcatctttgccggcaagcagctcgaggatgggcggacgcttgctgattacaac
atccagaaggagagtaccctccaccttgtgcttcgtcttaggggaggcatgcagatcttc
gtgaagacattgaccggcaagactatcacccttgaggttgagtcttccgacaccatcgac
aatgtcaaggccaagatccaggacaaggagggcattcctccggaccagcagaggctcatc
ttcgccggcaagcagctcgaggacggccgcacacttgctgactacaacatccagaaggag
agcaccctccacctggtgctccgcctgaggggtgggatgcaaatcttcgtgaagaccttg
actggacaaggagggcatccccccggatcagcaacgtctgatctttgctggcaagcagct
ggaggatggccgcacgcttgctga
DBGET
integrated database retrieval system
