KEGG   Panicum virgatum (switchgrass): 120654697
Entry
120654697         CDS       T07260                                 
Name
(RefSeq) chaperone protein ClpB1-like
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120654697
Chaperones and folding catalysts [BR:pvir03110]
 Heat shock proteins
  HSP100
   120654697
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 nSTAND3 AAA_18 RuvB_N AAA_14 AAA_7 Sigma54_activat Zeta_toxin AAA_28 bpMoxR IstB_IS21 TniB AAA_19 Parvo_NS1 AAA_30 AAA_25 Torsin AAA_17 TIP49 DNA_pol3_delta2 DUF87 nSTAND1
Other DBs
NCBI-GeneID: 120654697
NCBI-ProteinID: XP_039788246
LinkDB
Position
1K:34293328..34297019
AA seq 632 aa
MMTTVSKTDPVIGRDDEINRVICVLCRRTKNSAILVGAPGVGKTSIAEGIAQRIVVGNVP
AALTGARIMELDLGAMVAATTLRGMFEERIKNVIQEAEDANGKVILFIDEMHMLLGANNI
SSMGAANLLKPALARGRIRCVGATTFEEYRKYIEKDAAFERRFEKVLVDETSLSATIAIL
RGLKKRYEEHHHTIIQDAAIVAAARLANRYITGRQFPDKAIDIIDEASAITRIHTDNQLK
GSNMQRNPVDALKKAIVCPEQIAQVVSRLTGIPVNSLAQDEKVKLMYLADRLQERIIGQQ
EAINLVAHAVLRSRTGLDQPGQPIGSFLFLGSTGVGKTELAKALAEQLFGSERMLIRFDM
TEFVGSHSVLRLIGAPPSYQGHDDGGQLTEKVKQRPYSAILFDEIEKADPAVFNVFLQLL
DDGVLTDGKGKTVDFKNTIIIMTSNLGAEYLMEAMTGEKSMEAARDLVIKQAEKHFKPEF
LNRLSEIVVFEPLSQDKMRVVANVQMKAIIARLAEKGINIIASEAVLDVVLSESHNPLYG
ARPIRRWLQKNVMTKLAEMFVKGEIDKETTVIIDASEDRKDLKYKVLKNARTLGKRPLIM
EISRDSDSDDDIDLNAPIVKKTKGIVISSDWK
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgatgaccacggttagcaagaccgacccggtgatcggccgtgatgatgagatcaaccgc
gtcatttgtgtcctttgtcgccgaacgaagaacagtgccatccttgttggtgcacccgga
gtgggcaagacctccattgccgagggaattgctcagcgcattgtggtgggaaatgtccct
gctgcgctcactggggcacgcatcatggagctcgacctcggtgcgatggtggctgcaacc
acattgcggggcatgttcgaggagcgcatcaagaatgtgatccaagaagcggaggatgcc
aacggcaaggtgatcctattcattgacgagatgcacatgctccttggtgccaacaacatt
agcagcatgggcgctgccaatctgctgaagccggcgttggctcgcggccgcattcgctgt
gtgggcgccaccacatttgaggaatatcgcaagtacatcgagaaggatgctgcgtttgaa
agacggttcgagaaggtgctcgttgacgaaacgagcttatcggcaaccattgccattctg
cggggcctaaagaagagatatgaagaacaccatcacaccataatccaggatgctgccatt
gtagccgctgcccgtcttgccaaccggtacatcactggtcgtcaatttcctgataaggca
attgatattatcgatgaagcaagtgccatcacaagaattcatactgacaaccagctgaaa
gggagcaacatgcaacgtaaccctgtggatgctctgaagaaagcaattgtttgcccagaa
caaattgcccaggttgtgagccgattgactggcattccagtcaattcactcgcccaggat
gagaaggtaaagctaatgtacctagcagataggctgcaagagcgaataattggccagcaa
gaagcaatcaatttggttgcacatgcagtgttaaggtcaaggactgggctagatcaacct
ggccaaccaataggatcttttcttttcttgggctcaactggtgttggcaagacagaactt
gcaaaggctcttgcagaacaactgtttggcagtgaaaggatgttgatccggttcgacatg
actgagtttgttggcagtcactcggtgctacgtctcattggagcacctcctagctatcaa
ggccacgacgatggaggacaactaaccgagaaagtcaagcaacggccatacagtgcaatc
ctttttgatgaaattgagaaggcggaccctgcagtgtttaatgttttcctccagctactt
gatgatggtgttttgaccgacggcaaaggaaaaactgtagattttaagaataccatcatt
attatgacttcaaatcttggagctgagtacctaatggaagcgatgaccggtgaaaaatcg
atggaggctgcacgtgacctcgtcatcaagcaggcagagaaacatttcaaacctgagttc
ctgaataggctcagtgagattgtggtatttgagccactctcacaagataaaatgagggtg
gttgctaatgttcagatgaaagccatcattgctcgtttagctgaaaagggcatcaatata
attgcaagtgaggctgttctggatgttgtcttgtctgaatcacacaacccactttatggt
gcaaggcccataaggaggtggctgcaaaagaatgtgatgacaaaacttgctgagatgttt
gttaaaggggaaatagataaagaaactactgtcatcatcgatgcttctgaagataggaaa
gatctgaagtataaagtactaaagaatgcacgcaccctagggaagaggcctctcataatg
gagatttcacgtgactccgacagtgacgatgacattgaccttaatgctcctatagtaaag
aaaacgaaggggatagtcatatcatctgactggaagtga

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