Panicum virgatum (switchgrass): 120654697
Help
Entry
120654697 CDS
T07260
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120654697
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP100
120654697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
nSTAND3
AAA_18
RuvB_N
AAA_14
AAA_7
Sigma54_activat
Zeta_toxin
AAA_28
bpMoxR
IstB_IS21
TniB
AAA_19
Parvo_NS1
AAA_30
AAA_25
Torsin
AAA_17
TIP49
DNA_pol3_delta2
DUF87
nSTAND1
Motif
Other DBs
NCBI-GeneID:
120654697
NCBI-ProteinID:
XP_039788246
LinkDB
All DBs
Position
1K:34293328..34297019
Genome browser
AA seq
632 aa
AA seq
DB search
MMTTVSKTDPVIGRDDEINRVICVLCRRTKNSAILVGAPGVGKTSIAEGIAQRIVVGNVP
AALTGARIMELDLGAMVAATTLRGMFEERIKNVIQEAEDANGKVILFIDEMHMLLGANNI
SSMGAANLLKPALARGRIRCVGATTFEEYRKYIEKDAAFERRFEKVLVDETSLSATIAIL
RGLKKRYEEHHHTIIQDAAIVAAARLANRYITGRQFPDKAIDIIDEASAITRIHTDNQLK
GSNMQRNPVDALKKAIVCPEQIAQVVSRLTGIPVNSLAQDEKVKLMYLADRLQERIIGQQ
EAINLVAHAVLRSRTGLDQPGQPIGSFLFLGSTGVGKTELAKALAEQLFGSERMLIRFDM
TEFVGSHSVLRLIGAPPSYQGHDDGGQLTEKVKQRPYSAILFDEIEKADPAVFNVFLQLL
DDGVLTDGKGKTVDFKNTIIIMTSNLGAEYLMEAMTGEKSMEAARDLVIKQAEKHFKPEF
LNRLSEIVVFEPLSQDKMRVVANVQMKAIIARLAEKGINIIASEAVLDVVLSESHNPLYG
ARPIRRWLQKNVMTKLAEMFVKGEIDKETTVIIDASEDRKDLKYKVLKNARTLGKRPLIM
EISRDSDSDDDIDLNAPIVKKTKGIVISSDWK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccacggttagcaagaccgacccggtgatcggccgtgatgatgagatcaaccgc
gtcatttgtgtcctttgtcgccgaacgaagaacagtgccatccttgttggtgcacccgga
gtgggcaagacctccattgccgagggaattgctcagcgcattgtggtgggaaatgtccct
gctgcgctcactggggcacgcatcatggagctcgacctcggtgcgatggtggctgcaacc
acattgcggggcatgttcgaggagcgcatcaagaatgtgatccaagaagcggaggatgcc
aacggcaaggtgatcctattcattgacgagatgcacatgctccttggtgccaacaacatt
agcagcatgggcgctgccaatctgctgaagccggcgttggctcgcggccgcattcgctgt
gtgggcgccaccacatttgaggaatatcgcaagtacatcgagaaggatgctgcgtttgaa
agacggttcgagaaggtgctcgttgacgaaacgagcttatcggcaaccattgccattctg
cggggcctaaagaagagatatgaagaacaccatcacaccataatccaggatgctgccatt
gtagccgctgcccgtcttgccaaccggtacatcactggtcgtcaatttcctgataaggca
attgatattatcgatgaagcaagtgccatcacaagaattcatactgacaaccagctgaaa
gggagcaacatgcaacgtaaccctgtggatgctctgaagaaagcaattgtttgcccagaa
caaattgcccaggttgtgagccgattgactggcattccagtcaattcactcgcccaggat
gagaaggtaaagctaatgtacctagcagataggctgcaagagcgaataattggccagcaa
gaagcaatcaatttggttgcacatgcagtgttaaggtcaaggactgggctagatcaacct
ggccaaccaataggatcttttcttttcttgggctcaactggtgttggcaagacagaactt
gcaaaggctcttgcagaacaactgtttggcagtgaaaggatgttgatccggttcgacatg
actgagtttgttggcagtcactcggtgctacgtctcattggagcacctcctagctatcaa
ggccacgacgatggaggacaactaaccgagaaagtcaagcaacggccatacagtgcaatc
ctttttgatgaaattgagaaggcggaccctgcagtgtttaatgttttcctccagctactt
gatgatggtgttttgaccgacggcaaaggaaaaactgtagattttaagaataccatcatt
attatgacttcaaatcttggagctgagtacctaatggaagcgatgaccggtgaaaaatcg
atggaggctgcacgtgacctcgtcatcaagcaggcagagaaacatttcaaacctgagttc
ctgaataggctcagtgagattgtggtatttgagccactctcacaagataaaatgagggtg
gttgctaatgttcagatgaaagccatcattgctcgtttagctgaaaagggcatcaatata
attgcaagtgaggctgttctggatgttgtcttgtctgaatcacacaacccactttatggt
gcaaggcccataaggaggtggctgcaaaagaatgtgatgacaaaacttgctgagatgttt
gttaaaggggaaatagataaagaaactactgtcatcatcgatgcttctgaagataggaaa
gatctgaagtataaagtactaaagaatgcacgcaccctagggaagaggcctctcataatg
gagatttcacgtgactccgacagtgacgatgacattgaccttaatgctcctatagtaaag
aaaacgaaggggatagtcatatcatctgactggaagtga
DBGET
integrated database retrieval system