KEGG   Panicum virgatum (switchgrass): 120654722
Entry
120654722         CDS       T07260                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin C
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120654722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120654722
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120654722
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Dsc3_N DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 120654722
NCBI-ProteinID: XP_039788274
LinkDB
Position
1N:complement(4578706..4586800)
AA seq 381 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGQ
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatcttcgttaagacccttactggcaagaccatcaccctcgaggtggagtcctcc
gacactatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccagaccag
cagaggctcatcttcgctggcaagcagctcgaggatgggcgtacccttgccgactacaac
atccagaaggagagcaccctccacctggtgctccgcctgaggggaggcatgcagatcttt
gtgaagaccttgaccggcaagactatcaccctcgaggtggagtcctccgacaccattgat
aacgtcaaggcaaagatccaggacaaggagggcatccccccggaccagcagaggcttatc
ttcgccggcaagcagctggaggatggccgcactcttgcggactacaacatccagaaggag
agcaccctccacctggtgctccgcctgaggggaggcatgcagatcttcgtgaagactttg
accggcaagactatcaccctcgaggtggagtcctccgacaccattgacaacgtcaaggca
aagatccaggacaaggagggcatccccccggaccagcagaggcttatcttcgccggcaag
cagctggaggatggccgcactcttgcggactacaacatccagaaggagagcaccctccac
ctggtgctccgcctgaggggaggcatgcagatcttcgtgaagaccttgaccggcaagact
atcaccctcgaggtggagtcctccgacaccattgacaacgtcaaggcaaagatccaggac
aaggagggcatccccccggaccagcagaggcttatcttcgctggcaagcagctggaggat
ggccgcacccttgcggactacaacatccagaaggagagcaccctccacctggtgctccgc
ctgaggggagggatgcagatctttgtgaagaccttgactggcaagactatcactcttgag
gttgagagctccgacaccattgacaacgtgaaggccaagatccaggacaaggagggcatc
cccccggaccagcagcgtctgatcttcgccggcaagcagctggaggatggccgcactctt
gcggactacaatatccagaaggagtccactctccacctggtgcttcgtctccgtggtggc
cagtaa

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