Panicum virgatum (switchgrass): 120656506
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Entry
120656506 CDS
T07260
Name
(RefSeq) phenylalanine ammonia-lyase
KO
K13064
phenylalanine/tyrosine ammonia-lyase [EC:
4.3.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00360
Phenylalanine metabolism
pvir00940
Phenylpropanoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
120656506
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120656506
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.25 phenylalanine/tyrosine ammonia-lyase
120656506
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GFIT
Motif
Pfam:
Lyase_aromatic
VAD1-2
Motif
Other DBs
NCBI-GeneID:
120656506
NCBI-ProteinID:
XP_039790545
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Position
1N:complement(51261761..51265336)
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AA seq
701 aa
AA seq
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MAGNGLIVENDPLNWGAAAAELAGSHLDEVKRMVAQARQPVVKIEGSTLRVGQVAAVAAA
RDASGVAVELDEEARPRVKASSEWILDCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVEL
LRHLNAGIFGNDRDGHTLPSETVRAAMLVRINTLLQGYSGIRFEILEALAKLLNTGVSPC
LPLRGTITASGDLVPLSYIAGLITGRPNAQAVTADGRKVDAAEAFKLAGIDGGFFRLNPK
EGLAIVNGTSVGSALAATVLYDANVLAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPG
SIEAAAIMEHILEGSSFMKQAKKVNELDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKS
IEREVNSVNDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNE
FYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLGNPITNHVQSAEQHNQDVNSL
GLVSARKTAEAVDILKLMSSTYIVALCQAVDLRHLEENIKTSVKNTVTQVAKKVLTMNPT
GDLSTARFSEKDLITAIDREAVFTYAEDAASASLPLMQKLRAVLVDHALSSGDAEREPSV
FSKITKFEEELRAVLPREVEAARVAVAEGAAAVPNRIKDSRSFPLYRFVREELGCVFLTG
EKLKSPGEECNKVFIGISEGKLVDPMLECLKEWDGKPLPIN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaacggcctgatcgtggagaacgacccgctcaactggggcgcggcggcggcg
gagctggccgggagccacctggacgaggtgaagcggatggtggcgcaggcccggcagccc
gtggtgaagatcgagggctccaccctccgcgtcggccaggtggccgccgtcgccgccgcc
cgcgacgcgtccggcgtcgccgtcgagctcgacgaggaggcccgcccccgcgtcaaggcc
agcagcgagtggatcctcgactgcatcgcccacggcggcgacatctacggcgtcaccacc
ggcttcggcggcacctcgcaccgccgcaccaaggacgggcccgcgctccaggtcgagctg
ctcaggcatctcaacgccggcatcttcggcaacgaccgcgacggccacacgctgccgtcg
gagacggtccgcgcggcgatgctggtgcgcatcaacaccctcctccagggctactccggc
atccgcttcgagatcctcgaggccctcgccaagctgctcaacaccggcgtcagcccgtgc
ctgccgctccggggcaccatcaccgcctcgggcgacctcgtgccgctctcctacatcgcc
ggcctcatcacgggccgccccaacgcgcaggccgtcaccgccgacggcaggaaggtggac
gccgccgaggccttcaagctcgccggcatcgacggcggcttcttccgcctcaaccccaag
gaggggctcgccatcgtcaacggcacctccgtcggctccgcactcgccgccaccgtgctc
tacgacgccaacgtcctcgccgtgctctccgaggtcctctccgccgtcttctgcgaggtc
atgaacggcaagcccgagtacaccgaccacctcacccacaagctcaagcaccacccgggc
tccatcgaggccgccgccatcatggagcacatcctcgagggcagctccttcatgaagcaa
gccaagaaggtcaacgagctcgacccgctgctcaagcccaagcaggaccgctacgcgctc
cgcacctcgccgcagtggctcggcccgcagatcgaggtcatccgcgccgccaccaagtcc
atcgagcgcgaggtcaactccgtcaacgacaaccccgtcatcgacgtccaccgcggcaag
gcgctccacggcggcaacttccagggcacccccatcggcgtctccatggacaacgcccgc
ctcgccatcgccaacatcggcaagctcatgttcgcgcagttctccgagctcgtcaacgag
ttctacaacaacggcctcacctccaacctggccggcagccgcaaccccagcctggactac
ggcttcaagggcaccgagatcgccatggcctcctactgctccgagctccagtacctcggc
aaccccatcaccaaccacgtccagagcgcggagcagcacaaccaggacgtcaactccctc
ggcctcgtctccgccaggaagaccgccgaggccgtcgacatcctcaagctcatgtcctcc
acctacatcgtcgcgctctgccaggccgtcgacctgcgccacctcgaggagaacatcaag
acctccgtcaagaacaccgtcacccaggtggccaagaaggtgctcaccatgaaccccacc
ggcgacctctccaccgcgcgcttcagcgagaaggacctcatcaccgccatcgaccgcgag
gccgtcttcacctacgccgaggacgcggccagcgccagcctcccgctcatgcagaagctg
cgcgccgtgctggtggaccacgccctcagcagcggcgacgccgagcgcgagccctccgtg
ttctctaagatcaccaagttcgaggaggagctccgcgcggtgctgccccgggaggtggag
gccgcccgcgtcgccgtcgccgagggcgccgccgccgtgcccaaccggatcaaggacagc
cgctcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtcttcctcaccggc
gagaagctcaagtcccccggcgaggagtgcaacaaggtcttcatcggcatcagcgagggc
aagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagcccctgcccatc
aactaa
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